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BDBM50605116

E3L062663
Internal ID: BDB062663
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB062663/BDB062663.sdf
Basic Properties
Compound ID
E3L062663
Internal ID
BDB062663
Molecular formula
C38H39Cl2F2N3O5
Molecular weight
726.648000
Exact mass
725.223483
XLogP
7.9107
TPSA
119.9200
HBA / HBD
6 / 5
Rotatable bonds
11
Heavy atoms / rings
50 / 5
Activity summary
Ki unknown 1.60000000 nM
1 activity record(s) imported
InChIKey
QVLVXOHPVNJAAP-HYPAZGOZSA-N
SMILES
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](CNCc2cccc(O)c2)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
Aliases
BDBM50605116 (preferred) BDBM50605116 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50605116 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50605116 Open - 10.7270/Q2V69PP3 PMID: 35420431
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](CNCc2cccc(O)c2)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062663/BDB062663.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062663/BDB062663.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062663/BDB062663.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062663/BDB062663.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062663/BDB062663.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50605116 Ki 1.6 nM Very high DOI: 10.7270/Q2V69PP3
PMID: 35420431 		1