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BDBM50605125

E3L062672
Internal ID: BDB062672
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB062672/BDB062672.sdf
Basic Properties
Compound ID
E3L062672
Internal ID
BDB062672
Molecular formula
C35H37Cl2F2N5O4
Molecular weight
700.614000
Exact mass
699.219066
XLogP
6.9282
TPSA
128.3700
HBA / HBD
6 / 5
Rotatable bonds
11
Heavy atoms / rings
48 / 5
Activity summary
Ki unknown 0.80000000 nM
1 activity record(s) imported
InChIKey
RDDBHCDHHFFBJD-JNHBBQSGSA-N
SMILES
COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](CNCc2cnc[nH]2)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F
Aliases
BDBM50605125 (preferred) BDBM50605125 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50605125 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50605125 Open - 10.7270/Q2V69PP3 PMID: 35420431
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(C(=O)O)ccc1NC(=O)[C@@H]1N[C@@H](CC(C)(C)C)[C@](CNCc2cnc[nH]2)(c2ccc(Cl)cc2F)[C@H]1c1cccc(Cl)c1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062672/BDB062672.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062672/BDB062672.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062672/BDB062672.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062672/BDB062672.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062672/BDB062672.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50605125 Ki 0.8 nM Very high DOI: 10.7270/Q2V69PP3
PMID: 35420431 		1