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BDBM50605137

E3L062684
Internal ID: BDB062684
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB062684/BDB062684.sdf
Basic Properties
Compound ID
E3L062684
Internal ID
BDB062684
Molecular formula
C38H37Cl2F2N3O5
Molecular weight
724.632000
Exact mass
723.207833
XLogP
8.1459
TPSA
127.7600
HBA / HBD
5 / 5
Rotatable bonds
11
Heavy atoms / rings
50 / 5
Activity summary
Ki unknown 3.80000000 nM
1 activity record(s) imported
InChIKey
MFNBDHZVNWSVHQ-XIWNBUHBSA-N
SMILES
CC(C)(C)C[C@@H]1N[C@@H](C(=O)Nc2ccc(C(=O)O)cc2)[C@H](c2cccc(Cl)c2F)[C@@]1(CNc1ccc(CC(=O)O)cc1)c1ccc(Cl)cc1F
Aliases
BDBM50605137 (preferred) BDBM50605137 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50605137 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50605137 Open - 10.7270/Q2V69PP3 PMID: 35420431
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)C[C@@H]1N[C@@H](C(=O)Nc2ccc(C(=O)O)cc2)[C@H](c2cccc(Cl)c2F)[C@@]1(CNc1ccc(CC(=O)O)cc1)c1ccc(Cl)cc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062684/BDB062684.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062684/BDB062684.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062684/BDB062684.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062684/BDB062684.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062684/BDB062684.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50605137 Ki 3.8 nM Very high DOI: 10.7270/Q2V69PP3
PMID: 35420431 		1