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BDBM50605344

E3L062724
Internal ID: BDB062724
Activity data available Local docking-ready structure
Dock with P61964
Structure
/e3_file/ligand_db/generated/BDB062724/BDB062724.sdf
Basic Properties
Compound ID
E3L062724
Internal ID
BDB062724
Molecular formula
C26H25F3N6O
Molecular weight
494.521000
Exact mass
494.204194
XLogP
4.5610
TPSA
68.8400
HBA / HBD
4 / 0
Rotatable bonds
5
Heavy atoms / rings
36 / 5
Activity summary
Ki unknown 0.59000000 nM
1 activity record(s) imported
InChIKey
AZNSVNKRAUMUJR-UHFFFAOYSA-N
SMILES
Cc1cccnc1CN1CCc2c(cc(Cn3ccnc3C)cc2-c2cn(C)nc2C(F)(F)F)C1=O
Aliases
BDBM50605344 (preferred) 7-[(2-Methylimidazol-1-yl)methyl]-2-[(3-methylpyridin-2-yl)methyl]-5-[1-methyl-3-(trifluoromethyl)pyrazol-4-yl]-3,4-dihydroisoquinolin-1-one (source_name) BDBM50605344 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P61964 WDR5;BIG3
WD repeat-containing protein 5		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50605344 medium
; target=WD repeat-containing protein 5
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50605344 Open - 10.7270/Q2JQ153M PMID: 35436124
PubChem CID153572565 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cccnc1CN1CCc2c(cc(Cn3ccnc3C)cc2-c2cn(C)nc2C(F)(F)F)C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062724/BDB062724.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062724/BDB062724.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062724/BDB062724.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062724/BDB062724.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062724/BDB062724.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 5
P61964
E3 ligase component 		BindingDB:BDBM50605344 Ki 0.59 nM Very high DOI: 10.7270/Q2JQ153M
PMID: 35436124 		1