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US11518767, Example 1-2

E3L062820
Internal ID: BDB062820
Activity data available Local docking-ready structure
Dock with Q9BVC4
Structure
/e3_file/ligand_db/generated/BDB062820/BDB062820.sdf
Basic Properties
Compound ID
E3L062820
Internal ID
BDB062820
Molecular formula
C18H22N6O
Molecular weight
338.415000
Exact mass
338.185509
XLogP
3.2377
TPSA
107.0900
HBA / HBD
7 / 2
Rotatable bonds
3
Heavy atoms / rings
25 / 4
Activity summary
IC50 unknown 1.00000000 nM
1 activity record(s) imported
InChIKey
JGRISWOXHZGZPV-UHFFFAOYSA-N
SMILES
CC(C)CC1(C)CN(c2ccc3oc(N)nc3c2)c2c(N)ncnc21
Aliases
BDBM50606733 (preferred) US11518767, Example 1-2 (source_name) BDBM50606733 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9BVC4 MLST8;GBL;LST8
Target of rapamycin complex subunit LST8		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50606733 medium
; target=Target of rapamycin complex subunit LST8
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50606733 Open - 10.7270/Q2ZG6XB2 PMID: 35688004
PubChem CID142608599 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)CC1(C)CN(c2ccc3oc(N)nc3c2)c2c(N)ncnc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB062820/BDB062820.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB062820/BDB062820.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB062820/BDB062820.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB062820/BDB062820.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB062820/BDB062820.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Target of rapamycin complex subunit LST8
Q9BVC4
E3 ligase component 		BindingDB:BDBM50606733 IC50 1 nM Very high DOI: 10.7270/Q2ZG6XB2
PMID: 35688004 		1