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BDBM50616319

E3L063347
Internal ID: BDB063347
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB063347/BDB063347.sdf
Basic Properties
Compound ID
E3L063347
Internal ID
BDB063347
Molecular formula
C19H16N6O
Molecular weight
344.378000
Exact mass
344.138559
XLogP
3.7861
TPSA
84.0400
HBA / HBD
5 / 2
Rotatable bonds
4
Heavy atoms / rings
26 / 5
Activity summary
IC50 unknown 55.00000000 nM
1 activity record(s) imported
InChIKey
PZZRENAZVFJVPG-UHFFFAOYSA-N
SMILES
Cc1c[nH]c2ccc(-c3cnc(NCc4ccco4)n4cnnc34)cc12
Aliases
BDBM50616319 (preferred) N-(furan-2-ylmethyl)-8-(3-methyl-1H-indol-5-yl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine (source_name) BDBM50616319 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50616319 medium
; target=Polycomb protein EED
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50616319 Open - 10.1021/acs.jmedchem.2c02028 PMID: 36580346
PubChem CID172442918 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1c[nH]c2ccc(-c3cnc(NCc4ccco4)n4cnnc34)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063347/BDB063347.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063347/BDB063347.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063347/BDB063347.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063347/BDB063347.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063347/BDB063347.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM50616319 IC50 55 nM High DOI: 10.1021/acs.jmedchem.2c02028
PMID: 36580346 		1