< Back to small molecule database

BDBM50622683

E3L063647
Internal ID: BDB063647
Activity data available Local docking-ready structure
Dock with Q9HCE7
Structure
/e3_file/ligand_db/generated/BDB063647/BDB063647.sdf
Basic Properties
Compound ID
E3L063647
Internal ID
BDB063647
Molecular formula
C22H17ClF2N4O3
Molecular weight
458.852000
Exact mass
458.095725
XLogP
4.6317
TPSA
82.0600
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
32 / 4
Activity summary
IC50 unknown 700.00000000 nM
1 activity record(s) imported
InChIKey
FVQOEFCQCLPHPB-UHFFFAOYSA-N
SMILES
Cc1c(C(=O)Nc2c(C)n(C)n(-c3ccccc3F)c2=O)noc1-c1ccc(Cl)cc1F
Aliases
BDBM50622683 (preferred) 5-(4-chloro-2-fluorophenyl)-N-[1-(2-fluorophenyl)-2,3-dimethyl-5-oxopyrazol-4-yl]-4-methyl-1,2-oxazole-3-carboxamide (source_name) BDBM50622683 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q9HCE7 SMURF1;KIAA1625
E3 ubiquitin-protein ligase SMURF1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50622683 medium
; target=E3 ubiquitin-protein ligase SMURF1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50622683 Open - 10.1021/acs.jmedchem.3c00229 PMID: 37294287
PubChem CID172463937 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1c(C(=O)Nc2c(C)n(C)n(-c3ccccc3F)c2=O)noc1-c1ccc(Cl)cc1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063647/BDB063647.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063647/BDB063647.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063647/BDB063647.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063647/BDB063647.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063647/BDB063647.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase SMURF1
Q9HCE7
E3 ligase component 		BindingDB:BDBM50622683 IC50 700 nM Moderate DOI: 10.1021/acs.jmedchem.3c00229
PMID: 37294287 		1