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BDBM50626174

E3L063684
Internal ID: BDB063684
Activity data available Local docking-ready structure
Dock with O43791
Structure
/e3_file/ligand_db/generated/BDB063684/BDB063684.sdf
Basic Properties
Compound ID
E3L063684
Internal ID
BDB063684
Molecular formula
C20H16BrClN2O7S
Molecular weight
543.779000
Exact mass
541.955012
XLogP
2.6190
TPSA
129.3100
HBA / HBD
7 / 3
Rotatable bonds
7
Heavy atoms / rings
32 / 4
Activity summary
IC50 > 100000.00000000 nM
1 activity record(s) imported
InChIKey
WZHMUJGBYLFHGC-DNVCBOLYSA-N
SMILES
O=C(O)C1=C(CO)CS[C@@H]2[C@H](NC(=O)c3ccc(COc4ccc(Br)cc4Cl)o3)C(=O)N12
Aliases
BDBM50626174 (preferred) (6R,7R)-7-[[5-[(4-bromo-2-chlorophenoxy)methyl]furan-2-carbonyl]amino]-3-(hydroxymethyl)-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid (source_name) BDBM50626174 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O43791 SPOP
Speckle-type POZ protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50626174 medium
; target=Speckle-type POZ protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50626174 Open - 10.1021/acsmedchemlett.3c00515 PMID: 38352842
PubChem CID172442227 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)C1=C(CO)CS[C@@H]2[C@H](NC(=O)c3ccc(COc4ccc(Br)cc4Cl)o3)C(=O)N12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063684/BDB063684.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063684/BDB063684.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063684/BDB063684.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063684/BDB063684.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063684/BDB063684.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Speckle-type POZ protein
O43791
E3 ligase component 		BindingDB:BDBM50626174 IC50 >100000 nM Low DOI: 10.1021/acsmedchemlett.3c00515
PMID: 38352842 		1