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BDBM50626194

E3L063704
Internal ID: BDB063704
Activity data available Local docking-ready structure
Dock with O43791
Structure
/e3_file/ligand_db/generated/BDB063704/BDB063704.sdf
Basic Properties
Compound ID
E3L063704
Internal ID
BDB063704
Molecular formula
C21H18N2O6S
Molecular weight
426.450000
Exact mass
426.088557
XLogP
2.3968
TPSA
109.0800
HBA / HBD
6 / 2
Rotatable bonds
7
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 6330.00000000 nM
1 activity record(s) imported
InChIKey
MJJUEVVJYNFSHY-OXQOHEQNSA-N
SMILES
C=CC1=C(C(=O)O)N2C(=O)[C@@H](NC(=O)c3ccc(COc4ccccc4)o3)[C@H]2SC1
Aliases
BDBM50626194 (preferred) (6R,7R)-3-ethenyl-8-oxo-7-[[5-(phenoxymethyl)furan-2-carbonyl]amino]-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid (source_name) BDBM50626194 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O43791 SPOP
Speckle-type POZ protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50626194 medium
; target=Speckle-type POZ protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50626194 Open - 10.1021/acsmedchemlett.3c00515 PMID: 38352842
PubChem CID172469027 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=CC1=C(C(=O)O)N2C(=O)[C@@H](NC(=O)c3ccc(COc4ccccc4)o3)[C@H]2SC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063704/BDB063704.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063704/BDB063704.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063704/BDB063704.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063704/BDB063704.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063704/BDB063704.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Speckle-type POZ protein
O43791
E3 ligase component 		BindingDB:BDBM50626194 IC50 6330 nM Low DOI: 10.1021/acsmedchemlett.3c00515
PMID: 38352842 		1