< Back to small molecule database

BDBM50627464

E3L063919
Internal ID: BDB063919
Activity data available Local docking-ready structure
Dock with Q92630
Structure
/e3_file/ligand_db/generated/BDB063919/BDB063919.sdf
Basic Properties
Compound ID
E3L063919
Internal ID
BDB063919
Molecular formula
C18H22N4O2S
Molecular weight
358.467000
Exact mass
358.146347
XLogP
2.7737
TPSA
75.6100
HBA / HBD
6 / 2
Rotatable bonds
6
Heavy atoms / rings
25 / 3
Activity summary
IC50 unknown 93.00000000 nM
3 activity record(s) imported
InChIKey
CHQYAWLKOUOTQO-QVYJARAXSA-N
SMILES
COC[C@@H](CC(C)C)NC1=N/C(=C\c2ccc3ncsc3c2)C(=O)N1
Aliases
BDBM50627464 (preferred) 5-(6-benzothiazolylmethylene)-3,5-dihydro-2-(((1S)-1-(methoxymethyl)-3-methylbutyl)amino)-4H-Imidazol-4-one, (5Z)- (source_name) BDBM50627464 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92630 DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50627464 medium
; target=Dual specificity tyrosine-phosphorylation-regulated kinase 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50627464 Open - 10.1021/acs.jmedchem.3c00884; 10.1021/acs.jmedchem.3c01888 PMID: 37487467; 38051674
PubChem CID162346700 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC[C@@H](CC(C)C)NC1=N/C(=C\c2ccc3ncsc3c2)C(=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063919/BDB063919.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063919/BDB063919.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063919/BDB063919.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063919/BDB063919.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063919/BDB063919.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM50627464 IC50 202 nM Moderate DOI: 10.1021/acs.jmedchem.3c01888
PMID: 38051674 		1
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM50627464 IC50 273 nM Moderate DOI: 10.1021/acs.jmedchem.3c00884
PMID: 37487467 		1
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM50627464 IC50 93 nM High DOI: 10.1021/acs.jmedchem.3c01888
PMID: 38051674 		1