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BDBM50627471

E3L063926
Internal ID: BDB063926
Activity data available Local docking-ready structure
Dock with Q92630
Structure
/e3_file/ligand_db/generated/BDB063926/BDB063926.sdf
Basic Properties
Compound ID
E3L063926
Internal ID
BDB063926
Molecular formula
C20H24N4O2S
Molecular weight
384.505000
Exact mass
384.161997
XLogP
3.3079
TPSA
75.6100
HBA / HBD
6 / 2
Rotatable bonds
5
Heavy atoms / rings
27 / 4
Activity summary
IC50 unknown 1601.00000000 nM
1 activity record(s) imported
InChIKey
BUDGLAJKNWCXIM-SXGWCWSVSA-N
SMILES
COCC(NC1=N/C(=C\c2ccc3ncsc3c2)C(=O)N1)C1CCCCC1
Aliases
BDBM50627471 (preferred) (5Z)-5-(1,3-benzothiazol-6-ylmethylidene)-2-(1-cyclohexyl-2-methoxyethyl)iminoimidazolidin-4-one (source_name) BDBM50627471 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92630 DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50627471 medium
; target=Dual specificity tyrosine-phosphorylation-regulated kinase 2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50627471 Open - 10.1021/acs.jmedchem.3c00884 PMID: 37487467
PubChem CID162346750 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COCC(NC1=N/C(=C\c2ccc3ncsc3c2)C(=O)N1)C1CCCCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB063926/BDB063926.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB063926/BDB063926.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB063926/BDB063926.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB063926/BDB063926.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB063926/BDB063926.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Dual specificity tyrosine-phosphorylation-regulated kinase 2
Q92630
E3 ligase component 		BindingDB:BDBM50627471 IC50 1601 nM Low DOI: 10.1021/acs.jmedchem.3c00884
PMID: 37487467 		1