< Back to small molecule database

BDBM50632640

E3L064432
Internal ID: BDB064432
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB064432/BDB064432.sdf
Basic Properties
Compound ID
E3L064432
Internal ID
BDB064432
Molecular formula
C18H19BrClN5O2
Molecular weight
452.740000
Exact mass
451.041065
XLogP
2.9861
TPSA
96.0900
HBA / HBD
6 / 3
Rotatable bonds
5
Heavy atoms / rings
27 / 4
Activity summary
Ki unknown 8400.00000000 nM
1 activity record(s) imported
InChIKey
XYRGBYVDYTWOAH-LNSITVRQSA-N
SMILES
O[C@H]1[C@H](Cn2cnc3c(NCc4cccc(Br)c4)nc(Cl)nc32)CC[C@H]1O
Aliases
BDBM50632640 (preferred) (1R,2S,3S)-3-[[6-[(3-bromophenyl)methylamino]-2-chloropurin-9-yl]methyl]cyclopentane-1,2-diol (source_name) BDBM50632640 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50632640 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50632640 Open - 10.1021/acs.jmedchem.2c02071 PMID: 36967575
PubChem CID172462680 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O[C@H]1[C@H](Cn2cnc3c(NCc4cccc(Br)c4)nc(Cl)nc32)CC[C@H]1O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB064432/BDB064432.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB064432/BDB064432.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB064432/BDB064432.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB064432/BDB064432.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB064432/BDB064432.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component
BindingDB:BDBM50632640 Ki 8400 nM Low DOI: 10.1021/acs.jmedchem.2c02071
PMID: 36967575
1