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BDBM50637898

E3L064718
Internal ID: BDB064718
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB064718/BDB064718.sdf
Basic Properties
Compound ID
E3L064718
Internal ID
BDB064718
Molecular formula
C38H47ClN4O4
Molecular weight
659.271000
Exact mass
658.328584
XLogP
6.5835
TPSA
65.5600
HBA / HBD
6 / 0
Rotatable bonds
9
Heavy atoms / rings
47 / 6
Activity summary
IC50 unknown 1.70000000 nM
1 activity record(s) imported
InChIKey
CLRSLRWKONPSRQ-IIPSPAQQSA-N
SMILES
COc1cc2c(cc1OC(C)C)[C@H](c1ccc(Cl)cc1)N(c1ccc(N(C)C[C@H]3CC[C@H](N4CCN(C)C(=O)C4)CC3)cc1)C(=O)C2
Aliases
BDBM50637898 (preferred) BDBM50637898 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50637898 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50637898 Open - 10.7270/Q2RV0TBG PMID: 38581730
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc2c(cc1OC(C)C)[C@H](c1ccc(Cl)cc1)N(c1ccc(N(C)C[C@H]3CC[C@H](N4CCN(C)C(=O)C4)CC3)cc1)C(=O)C2 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB064718/BDB064718.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB064718/BDB064718.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB064718/BDB064718.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB064718/BDB064718.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB064718/BDB064718.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50637898 IC50 1.7 nM Very high DOI: 10.7270/Q2RV0TBG
PMID: 38581730 		1