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BDBM50646517

E3L065068
Internal ID: BDB065068
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB065068/BDB065068.sdf
Basic Properties
Compound ID
E3L065068
Internal ID
BDB065068
Molecular formula
C29H24F3N7O
Molecular weight
543.553000
Exact mass
543.199443
XLogP
5.8567
TPSA
83.4200
HBA / HBD
5 / 0
Rotatable bonds
5
Heavy atoms / rings
40 / 6
Activity summary
IC50 > 10000.00000000 nM
1 activity record(s) imported
InChIKey
OLLXOOGQSCQULX-UHFFFAOYSA-N
SMILES
CC(C)n1cc(C(F)(F)F)nc1-c1ccc(Cn2c(=O)ccc3cnc(-c4cccc5cnn(C)c45)nc32)cc1
Aliases
BDBM50646517 (preferred) 2-(1-Methylindazol-7-yl)-8-[[4-[1-propan-2-yl-4-(trifluoromethyl)imidazol-2-yl]phenyl]methyl]pyrido[2,3-d]pyrimidin-7-one (source_name) BDBM50646517 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50646517 medium
; target=WD repeat-containing protein 48
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50646517 Open - 10.7270/Q2Z89J20 PMID: 38889606
PubChem CID177377984 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)n1cc(C(F)(F)F)nc1-c1ccc(Cn2c(=O)ccc3cnc(-c4cccc5cnn(C)c45)nc32)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB065068/BDB065068.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB065068/BDB065068.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB065068/BDB065068.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB065068/BDB065068.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB065068/BDB065068.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
WD repeat-containing protein 48
Q8TAF3
E3 ligase component 		BindingDB:BDBM50646517 IC50 >10000 nM Low DOI: 10.7270/Q2Z89J20
PMID: 38889606 		1