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BDBM50649568

E3L065250
Internal ID: BDB065250
Activity data available Local docking-ready structure
Dock with O96028
Structure
/e3_file/ligand_db/generated/BDB065250/BDB065250.sdf
Basic Properties
Compound ID
E3L065250
Internal ID
BDB065250
Molecular formula
C18H23N5O
Molecular weight
325.416000
Exact mass
325.190260
XLogP
2.7948
TPSA
74.0700
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
24 / 3
Activity summary
IC50 unknown 271.00000000 nM
1 activity record(s) imported
InChIKey
BDXVCKAXKWPDSL-UHFFFAOYSA-N
SMILES
COc1ccc2c(NC3CCN(C(C)C)CC3)nc(C#N)nc2c1
Aliases
BDBM50649568 (preferred) 7-Methoxy-4-[(1-propan-2-ylpiperidin-4-yl)amino]quinazoline-2-carbonitrile (source_name) BDBM50649568 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O96028 NSD2;KIAA1090;MMSET;TRX5;WHSC1
Histone-lysine N-methyltransferase NSD2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50649568 medium
; target=Histone-lysine N-methyltransferase NSD2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50649568 Open - 10.7270/Q2MS3ZG4 PMID: 39230932
PubChem CID172220428 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ccc2c(NC3CCN(C(C)C)CC3)nc(C#N)nc2c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB065250/BDB065250.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB065250/BDB065250.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB065250/BDB065250.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB065250/BDB065250.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB065250/BDB065250.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone-lysine N-methyltransferase NSD2
O96028
E3 ligase component 		BindingDB:BDBM50649568 IC50 271 nM Moderate DOI: 10.7270/Q2MS3ZG4
PMID: 39230932 		1