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21

E3L066619
Internal ID: LIG001189
MGD No standardized activity value Local docking-ready structure
Use for docking
Structure
/e3_file/ligand_db/generated/LIG001189/LIG001189.sdf
Basic Properties
Compound ID
E3L066619
Internal ID
LIG001189
Molecular formula
C47H53F3N8O6
Molecular weight
882.985000
Exact mass
882.404016
XLogP
7.1976
TPSA
178.8600
HBA / HBD
10 / 4
Rotatable bonds
10
Heavy atoms / rings
64 / 9
Activity summary
No standardized activity value was imported for this source record.
InChIKey
PRYXVIJFTJCBPJ-WILPXKMRSA-N
SMILES
CN(CC1CCC(n2cc3cc(NC(=O)c4cccc(C(F)(F)F)n4)c(C(C)(C)O)cc3n2)CC1)[C@H]1CCC2(CC1)C[C@H](Nc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)C2
Aliases
21 (preferred) 22 (synonym) 22 (source_name) MolGlueDB:518 (source_id) MolGlueDB:518 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
MolGlueDB MGDB518 Open -
BindingDB
Related evidence		 BDBM50639846 Open - 10.7270/Q23F4V8G PMID: 38920289
same_connectivity_stereo_or_protonation_diff; Tanimoto 1.000000
Deduplication Evidence
Related source Related name Relationship Decision Tanimoto Note
BindingDB:BDBM50639846 BDBM50639846 same_connectivity_stereo_or_protonation_diff keep_bindingdb_stereo_or_protonation_variant 1.000000
chiral 1.000000 		Morgan non-chiral Tanimoto >= 0.95; retained for SAR/stereo review
BindingDB:BDBM50639846 BDBM50639846 same_connectivity_stereo_or_protonation_diff keep_bindingdb_stereo_or_protonation_variant - Connectivity InChIKey matches, but full InChIKey/isomeric SMILES differs
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN(CC1CCC(n2cc3cc(NC(=O)c4cccc(C(F)(F)F)n4)c(C(C)(C)O)cc3n2)CC1)[C@H]1CCC2(CC1)C[C@H](Nc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)C2 keep_base
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/LIG001189/LIG001189.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/LIG001189/LIG001189.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/LIG001189/LIG001189.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/LIG001189/LIG001189.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/LIG001189/LIG001189.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
No standardized activity value is available in the imported source data for this compound. The E3 relation and literature/source evidence above are still retained for traceability.