E3Docker 2.0
- An Integrated Platform for E3 Ligase Discovery and Docking
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Protein cereblon
Uniprot accession number:
Q96SW2
Recommend structure for docking:
7bqv_A
Choose Structure:
7bqv_A
7bqu_A
5fqd_B
5fqd_E
8oiz_B
8ojh_B
8rq9_A
8rq9_C
4tz4_C
8d7u_B
8d7w_B
8d7z_B
7u8f_A
7u8f_D
5v3o_C
8d7v_B
6h0f_B
6h0f_E
6h0f_H
6h0f_K
6boy_B
6bn7_B
6uml_C
5hxb_C
5hxb_Z
8d80_B
6xk9_C
6xk9_Z
8dey_A
7lps_B
7lps_E
7lps_H
7lps_K
8d81_B
6h0g_B
6h0g_E
8cvp_B
8d7x_B
8d7y_B
8dey_D
6bn9_B
6bnb_B
AF(87)
Upload Receptor:
Optional. Upload a PDB receptor if you do not want to use a predefined E3 structure.
Select box:
Select predefined box
Define user-specified box
Please select the box
Please click to choose the center
Input Ligand:
Upload your molecule
Draw your molecule
Search ligand database
Library ligand selected: 2-Piperidone (BDB000001)
BDB000001.sdf
Example input ligand file formats:
[For a single molecule:
mol2
,
sdf
,
smi
]
[For multiple molecules:
mol2
,
sdf
,
smi
]
(The number of small molecules for batch docking shall not exceed 50.)
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Open database
Local MOL2/SDF structures can be selected for docking; E3-ligand records without local files are shown with external 3D download links.
Selected ligand 3D structure
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