E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L020441
BDB020441
BDBM476742
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)[C@@H]3C(C)C)cc1
C29H35N7O3
529.645000
LKOVKVCJUKBIKS-ZEQKJWHPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476742; PubChem:CID121444013
Local ready
Direct docking supported
E3L020442
BDB020442
BDBM476743
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)[C@H]3C(C)C)cc1
C29H35N7O3
529.645000
LKOVKVCJUKBIKS-BVAGGSTKSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476743; PubChem:CID137497911
Local ready
Direct docking supported
E3L020443
BDB020443
BDBM476744
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)C32CCCCC2)cc1
C31H37N7O3
555.683000
DWYQOBBTTDPQFQ-RUZDIDTESA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476744; PubChem:CID137509589
Local ready
Direct docking supported
E3L020444
BDB020444
BDBM476745
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)[C@@H]3c2ccccc2)cc1
C32H33N7O3
563.662000
SQQCXUOIJMHDPD-GGXMVOPNSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476745; PubChem:CID121443303
Local ready
Direct docking supported
E3L020445
BDB020445
BDBM476747
C=CC(=O)Nc1ccc(C(=O)Nc2n[nH]c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)[C@H]3c2ccccc2)cc1
C32H33N7O3
563.662000
SQQCXUOIJMHDPD-UHSQPCAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476747; PubChem:CID121443972
Local ready
Direct docking supported
E3L020446
BDB020446
BDBM476750
C=CC(=O)Nc1cccc(C(=O)Nc2nn(C)c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)C3(C)C)c1
C29H35N7O3
529.645000
YANZGRPGNGIGRE-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476750; PubChem:CID121443949
Local ready
Direct docking supported
E3L020447
BDB020447
BDBM476752
C=CC(=O)Nc1ccc(C(=O)Nc2c3c(nn2C)C(C)(C)N(C(=O)N[C@H](CN(C)C)c2ccccc2)C3)cc1
C29H35N7O3
529.645000
ZNSLFIXWQIPEDT-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476752; PubChem:CID121444005
Local ready
Direct docking supported
E3L020448
BDB020448
BDBM476753
C=CC(=O)Nc1ccc(C(=O)Nc2nn(C)c3c2CN(C(=O)N[C@H](CN(C)C)c2ccccc2)C3(C)C)c(OC)c1
C30H37N7O4
559.671000
XCFYHAGBAZTPGS-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476753; PubChem:CID121444006
Local ready
Direct docking supported
E3L020449
BDB020449
BDBM476754
C=CC(=O)Nc1ccc(C(=O)Nc2c3c(nn2C)C(C)(C)N(C(=O)N[C@H](CN(C)C)c2ccccc2)C3)c(OC)c1
C30H37N7O4
559.671000
SRLFHMFKYFEFPP-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476754; PubChem:CID121444008
Local ready
Direct docking supported
E3L020450
BDB020450
BDBM476755
C=CC(=O)Nc1ccc(C(=O)Nc2nn(C)c3c2CN(C(=O)NC(C)CN(C)C)C3(C)C)cc1
C24H33N7O3
467.574000
WNOMOCPKNZTWEZ-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476755; PubChem:CID137497918
Local ready
Direct docking supported
E3L020451
BDB020451
BDBM476756
C=CC(=O)Nc1ccc(C(=O)Nc2nn(C)c3c2CN(C(=O)O[C@H](CN(C)C)c2ccccc2)C3(C)C)cc1
C29H34N6O4
530.629000
GMWAVNKSTCWVMZ-HSZRJFAPSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM476756; PubChem:CID121444010
Local ready
Direct docking supported
E3L020452
BDB020452
US10882866, Example Ib-57
CC(C1CC1)N1[C@H]2CCn3c(nc4cc(S(C)(=O)=O)ccc43)[C@H]2[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C32H29Cl2FN4O3S
639.580000
VCRSAGLDBKMXKI-YWPGCURUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM477098; PubChem:CID155759699
Local ready
Direct docking supported
E3L020453
BDB020453
US10882866, Example Ib-59
CC(=O)Nc1ccc2c(c1)nc1n2CC[C@H]2[C@@H]1[C@H](c1cccc(Cl)c1F)[C@]1(C(=O)Nc3cc(Cl)ccc31)N2C(C)C1CC1
C33H30Cl2FN5O2
618.540000
KKWBFMSEZMITID-KKHOIBHMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM477100; PubChem:CID155759697
Local ready
Direct docking supported
E3L020454
BDB020454
US10882866, Example Ib-106
COC(=O)c1ccc2c(c1)nc1n2CC[C@H]2[C@@H]1[C@H](c1cccc(Cl)c1F)[C@]1(C(=O)Nc3cc(Cl)ccc31)N2CC1CC1
C32H27Cl2FN4O3
605.497000
HYVTYCBCSWFFMO-ACIRYHQQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM477102; PubChem:CID129028566
Local ready
Direct docking supported
E3L020455
BDB020455
US10882866, Example Ib-133
CS(=O)(=O)OCCN1[C@H]2CCn3c(nc4cc(C(=O)O)ccc43)[C@H]2[C@H](c2cccc(Cl)c2F)[C@]12C(=O)Nc1cc(Cl)ccc12
C30H25Cl2FN4O6S
659.523000
OPFIMDKKVPHGTG-YDXRHMNESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM477119; PubChem:CID155455959
Local ready
Direct docking supported
E3L020456
BDB020456
US10882866, Example Ib-234
COc1cc2c(cc1C(N)=O)nc1n2CC[C@H]2[C@@H]1[C@H](c1cccc(Cl)c1F)[C@]1(C(=O)Nc3cc(Cl)ccc31)N2CC1CC1
C32H28Cl2FN5O3
620.512000
VNGOBGSXHVARAH-YIZCCYSQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM477202; PubChem:CID129028680
Local ready
Direct docking supported
E3L020457
BDB020457
US10899769, Example 1
CN1Cc2c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nc(C3CC3)n2CC1=O
C24H26F2N6O
452.509000
STWDWVRUKMSCNY-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM480484; PubChem:CID139558243
Local ready
Direct docking supported
E3L020458
BDB020458
US10899769, Example 2
CN1Cc2c(-c3ccc4c(c3)c(-c3cnn(C)c3)nn4C)nc(C3CC3)n2CC1=O
C22H23N7O
401.474000
FUFJLQXFXSHZQR-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM480485; PubChem:CID139558229
Local ready
Direct docking supported
E3L020459
BDB020459
US10899769, Example 3
CC1C(=O)N(C)Cc2c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nc(C3CC3)n21
C25H28F2N6O
466.536000
KECYVMVFYPBARC-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM480490; PubChem:CID139558288
Local ready
Direct docking supported
E3L020460
BDB020460
US10899769, Example 4
CCN1Cc2c(N3CCCc4cc(-c5cnn(C)c5)c(C(F)F)cc43)nc(C3CC3)n2CC1=O
C25H28F2N6O
466.536000
VZRANZJNGSLNQP-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM480491; PubChem:CID139558246
Local ready
Direct docking supported