E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L067410
LIG001980
2F
CCOc1ccc(-c2ccc3c(c2)CN(C2CCC(=O)NC2=O)C3=O)cc1
C21H20N2O4
364.401000
ZRRHUJUXYGQAEL-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB498
Local ready
Direct docking supported
E3L067411
LIG001981
16
COC(=O)c1cc(-c2cn(C3CCC(=O)NC3=O)nn2)cs1
C13H12N4O4S
320.330000
ZRULUUAUSOFXRQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1309
Local ready
Direct docking supported
E3L067412
LIG001982
QXG-133-5
O=C1CCC(N2Cc3cc(NC(=O)c4cc5ncccn5n4)ccc3C2=O)C(=O)N1
C20H16N6O4
404.386000
ZSHSKAUYLBAGAR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1074
Local ready
Direct docking supported
E3L067414
LIG001984
26b
C[C@@H]1C[C@H](C)CN(c2cc(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)c(Cl)cn2)C1
C25H34ClN5O2
472.033000
ZSNPZVSHDMCRMS-CALCHBBNSA-N P41182 B-cell lymphoma 6 protein
BindingDB, MolGlueDB
BindingDB:BDBM50511626; MolGlueDB:MGDB11
Local ready
Direct docking supported
E3L067415
LIG001985
7
COc1cc(-c2cn(C3CCC(=O)NC3=O)nn2)cs1
C12H12N4O3S
292.320000
ZSXWHDGBJSYIGI-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1300
Local ready
Direct docking supported
E3L067416
LIG001986
31
COc1ccc(C(C)(C)c2cc(Cl)c(OCC3CCN(C(=O)CCCCNc4cc5c(cc4F)C(=O)N(C4CCC(=O)NC4=O)C5=O)CC3)c(C#N)c2)cc1
C41H43ClFN5O7
772.274000
ZTKHOWSMLZBCTQ-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB1562
Local ready
Direct docking supported
E3L067417
LIG001987
cmp7b
O=C1CC(NC(=O)Cc2ccccc2)C(=O)N1
C12H12N2O3
232.239000
ZTMDMWMWWGOUHX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB910
Local ready
Direct docking supported
E3L067418
LIG001988
9p
COc1ccc(-c2ccc3[nH]c(=O)c4nnn(-c5ccc(N6CCN(C(=O)/C=C/C(=O)c7ccccc7OC)CC6)c(C(F)(F)F)c5)c4c3c2)cn1
C37H30F3N7O5
709.685000
ZUBWTELWMBXBTN-WYMLVPIESA-N - -
MolGlueDB
MolGlueDB:MGDB663
Local ready
Direct docking supported
E3L067419
LIG001989
EM12-SO2Pyr(4-Me)
Cc1cnn(S(=O)(=O)c2ccc3c(c2)C(=O)N(C2CCC(=O)NC2=O)C3)c1
C17H16N4O5S
388.405000
ZVFRHHYHSDAJGY-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, MolGlueDB
BindingDB:BDBM50630775; MolGlueDB:MGDB390
Local ready
Direct docking supported
E3L067420
LIG001990
cmp20
COc1ccc(N2CCN(Cc3ccc(COc4cccc5c4CN(C4CCC(=O)NC4=O)C5=O)cc3)CC2)cc1
C32H34N4O5
554.647000
ZVHZSJXUQWJNOO-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB681
Local ready
Direct docking supported
E3L067421
LIG001991
LYG-101
O=C1CCC(N2Cc3cc(CNC(=O)/C(Cc4ccc(F)cc4)=N/O)ccc3C2=O)C(=O)N1
C23H21FN4O5
452.442000
ZWMMBLXEKZBASQ-OVVQPSECSA-N - -
MolGlueDB
MolGlueDB:MGDB1320
Local ready
Direct docking supported
E3L067422
LIG001992
37
CC(C)(C)OC(=O)N1CC2(C1)CN(c1ccc3c(c1)C(=O)N(C1CCC(=O)NC1=O)C3=O)C2
C23H26N4O6
454.483000
ZWPXTCMYPKCOOX-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB106
Local ready
Direct docking supported
E3L067423
LIG001993
62
CC(=O)Nc1cccc2c1C(=O)N(C1CCC(=O)NC1=O)C2=O
C15H13N3O5
315.285000
ZWXLEWVWKZSKRA-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM511640; MolGlueDB:MGDB75
Local ready
Direct docking supported
E3L067424
LIG001994
Lib-B-12J
CC(C)c1ccccc1/C=N/NC(=O)COc1ccccc1-c1cccc2c1CN(C1CCC(=O)NC1=O)C2=O
C31H30N4O5
538.604000
ZXDSWBTZXSRYIG-KPGMTVGESA-N - -
MolGlueDB
MolGlueDB:MGDB135
Local ready
Direct docking supported
E3L067425
LIG001995
Z5000146157
CS(=O)(=O)Nc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C14H15N3O5S
337.357000
ZXIMMTPNPAZRJB-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB754
Local ready
Direct docking supported
E3L067426
LIG001996
57
O=C1CCC(N2C(=O)c3ccc(-c4cccnc4)cc3C2=O)C(=O)N1
C18H13N3O4
335.319000
ZXJLSZYUIYKZTA-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB951
Local ready
Direct docking supported
E3L067427
LIG001997
MY-11B
C#Cc1ccc([C@H]2CN(C(=O)C=C)[C@H]2C(=O)Nc2cccc3cccnc23)cc1
C24H19N3O2
381.435000
ZYFDJDJYKDPFFT-AUSIDOKSSA-N Q9Y4B6 -
e3_ligand
e3_ligand:97
Local ready
Direct docking supported
E3L067428
LIG001998
31
CC(C)Nc1n[nH]c2c(CN3CCCC3)cc(-c3ccc4c(c3F)CN(C3CCC(=O)NC3=O)C4=O)nc12
C27H30FN7O3
519.581000
ZYMWJRANZLPARA-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, MolGlueDB
BindingDB:BDBM755990; MolGlueDB:MGDB1522
Local ready
Direct docking supported
E3L067429
LIG001999
BIO-1975900 Parkin
CC(=O)N1Cc2c(-c3ccc(C(=O)N4CCCc5ccccc54)cc3)cnn2C[C@@H]1Cc1ccccc1
C31H30N4O2
490.607000
ZYSMPORNWLASGT-MHZLTWQESA-N - -
MolGlueDB
MolGlueDB:MGDB60
Local ready
Direct docking supported
E3L067430
LIG002000
LC-04-113
Cc1cnn2ccc(-c3ccc4c(c3)CN(C3CCC(=O)NC3=O)C4=O)nc12
C20H17N5O3
375.388000
ZYTXPWPQWMJJJR-UHFFFAOYSA-N - -
MolGlueDB
MolGlueDB:MGDB300
Local ready
Direct docking supported