E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L021581
BDB021581
US11111237, Example 176
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCCCC1
C27H33N3O4
463.578000
XJBBTPWJKBBCHO-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518036; PubChem:CID156207879
Local ready
Direct docking supported
E3L021582
BDB021582
US11111237, Example 177
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCC(F)(F)C1
C26H29F2N3O4
485.531000
MZAHFSNMWWLXRS-OAQYLSRUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518037; PubChem:CID156207886
Local ready
Direct docking supported
E3L021583
BDB021583
US11111237, Example 178
CN1CCN(C(=O)c2ccc3c(c2)OCCN(C[C@H](O)CN2CCc4ccccc4C2)C3=O)CC1
C27H34N4O4
478.593000
FOXJTSBDSCEOFM-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518038; PubChem:CID156208014
Local ready
Direct docking supported
E3L021584
BDB021584
US11111237, Example 179
CC1(C)CN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(CN3CCCC3)cc2O1
C28H37N3O3
463.622000
IRERUPHVHPLSMY-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518039; PubChem:CID156207944
Local ready
Direct docking supported
E3L021585
BDB021585
US11111237, Example 180
CC(=O)N1CCC(Oc2ccc3c(c2)OC(C)(C)CN(C[C@H](O)CN2CCc4ccccc4C2)C3=O)CC1
C30H39N3O5
521.658000
MGHQVMBDDPNDPT-XMMPIXPASA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518040; PubChem:CID156208186
Local ready
Direct docking supported
E3L021586
BDB021586
US11111237, Example 181
CC1(C)CN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(OC3CCN(C=O)CC3)cc2O1
C29H37N3O5
507.631000
WMAGKAVCYQZLRQ-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518041; PubChem:CID156208131
Local ready
Direct docking supported
E3L021587
BDB021587
US11111237, Example 182
CC1(C)CN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(CN3CCN(C4COC4)CC3)cc2O1
C31H42N4O4
534.701000
MNSXFBQUGUSGTD-HHHXNRCGSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518043; PubChem:CID156208154
Local ready
Direct docking supported
E3L021588
BDB021588
US11111237, Example 183
CC1(C)CN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(CN3CCC4(COC4)C3)cc2O1
C30H39N3O4
505.659000
CXDHLKQQOIFXJZ-RUZDIDTESA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518044; PubChem:CID156207823
Local ready
Direct docking supported
E3L021589
BDB021589
US11111237, Example 184
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCC(F)CC1
C27H32FN3O4
481.568000
HTQOVTIHOZBQSR-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518045; PubChem:CID156207995
Local ready
Direct docking supported
E3L021590
BDB021590
US11111237, Example 185
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCCC(C(F)(F)F)C1
C28H32F3N3O4
531.575000
XSOMSWKFVKEPKB-OZAIVSQSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518046; PubChem:CID156208218
Local ready
Direct docking supported
E3L021591
BDB021591
US11111237, Example 186
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCC(C(F)(F)F)CC1
C28H32F3N3O4
531.575000
VGYKABWMIOHHPX-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518047; PubChem:CID156208376
Local ready
Direct docking supported
E3L021592
BDB021592
US11111237, Example 187
CC1CN(C(=O)c2ccc3c(c2)OCCN(C[C@H](O)CN2CCc4ccccc4C2)C3=O)CC(C)O1
C28H35N3O5
493.604000
LPMICRSTRQEJOE-ZSHKSDETSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518048; PubChem:CID156208139
Local ready
Direct docking supported
E3L021593
BDB021593
US11111237, Example 188
O=C1c2ccc(C(=O)N3CC4CCC3C4)cc2OCCN1C[C@H](O)CN1CCc2ccccc2C1
C28H33N3O4
475.589000
GFAFCVPKWQGEEC-PBSMCPNCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518049; PubChem:CID156207998
Local ready
Direct docking supported
E3L021594
BDB021594
US11111237, Example 189
O=C1c2ccc(C(=O)N3C4CCC3COC4)cc2OCCN1C[C@H](O)CN1CCc2ccccc2C1
C28H33N3O5
491.588000
QNMMTQSQLRRABI-KXTRFFEISA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518050; PubChem:CID156207728
Local ready
Direct docking supported
E3L021595
BDB021595
US11111237, Example 190
CC1CN(C(=O)c2ccc3c(c2)OCCN(C[C@H](O)CN2CCc4ccccc4C2)C3=O)CCO1
C27H33N3O5
479.577000
YVDMOFOXPROJJJ-LEQGEALCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518051; PubChem:CID156207848
Local ready
Direct docking supported
E3L021596
BDB021596
US11111237, Example 191
CC1COCCN1C(=O)c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O
C27H33N3O5
479.577000
FWMKCOHCDXNXLC-LEQGEALCSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518052; PubChem:CID156207732
Local ready
Direct docking supported
E3L021597
BDB021597
US11111237, Example 192
CC1(C)CN(C[C@H](O)CN2CCc3ccccc3C2)C(=O)c2ccc(CN3CCOCC3)nc2O1
C27H36N4O4
480.609000
PAVQEYJQQAFITE-HSZRJFAPSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518053; PubChem:CID156208271
Local ready
Direct docking supported
E3L021598
BDB021598
US11111237, Example 193
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CC2CCCC2C1
C29H35N3O4
489.616000
YBDCYOQTFACZDQ-DDJHWDJXSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518054; PubChem:CID156207970
Local ready
Direct docking supported
E3L021599
BDB021599
US11111237, Example 194
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCCC(F)C1
C27H32FN3O4
481.568000
BNQDVMCZVKLWHY-OZAIVSQSSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518055; PubChem:CID156207827
Local ready
Direct docking supported
E3L021600
BDB021600
US11111237, Example 195
O=C(c1ccc2c(c1)OCCN(C[C@H](O)CN1CCc3ccccc3C1)C2=O)N1CCOC(F)(F)C1
C26H29F2N3O5
501.530000
DWHJVPDKUOGIEV-OAQYLSRUSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM518056; PubChem:CID156207900
Local ready
Direct docking supported