E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023741
BDB023741
US11242344, Example 1001.1
Cc1ncsc1-c1ccc([C@]2(C)NC(C3C[C@@H](O)CN3C(=O)[C@@H](c3cc(OCCCCCNC(=O)c4cc5c(cc4CS(C)(=O)=O)-c4cn(C)c(=O)c6[nH]cc(c46)CN5c4ncc(F)cc4F)no3)C(C)C)=NC2=O)cc1
C54H56F2N10O9S2
1091.233000
SDAVNUYOWAVNNJ-NOYZTCMCSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536275; PubChem:CID163407789
Local ready
Direct docking supported
E3L023742
BDB023742
US11242344, Example 117.1
Cc1noc(C(C(=O)N2C[C@H](O)CC2C2=NC(=O)[C@](C)(c3ccc(-c4scnc4C)cc3)N2)C(C)C)n1
C26H30N6O4S
522.631000
PECICTZKVKHDTH-WJSHSNFHSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536276; PubChem:CID142572445
Local ready
Direct docking supported
E3L023743
BDB023743
US11242344, Example 1001.2
Cc1ncsc1-c1ccc(C2(C)NC([C@H]3C[C@@H](O)CN3C(=O)[C@H](c3cc(OCCCCCNC(=O)c4cc5c(cc4CS(C)(=O)=O)-c4cn(C)c(=O)c6[nH]cc(c46)CN5c4ncc(F)cc4F)no3)C(C)C)=NC2=O)cc1
C54H56F2N10O9S2
1091.233000
SDAVNUYOWAVNNJ-WBTBCHDUSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536277; PubChem:CID163407790
Local ready
Direct docking supported
E3L023744
BDB023744
US11242344, Example 1001.4
Cc1ncsc1-c1ccc(C2(C)NC(C3C[C@@H](O)CN3C(=O)[C@H](c3cc(OCCCCCNC(=O)c4cc5c(cc4CS(C)(=O)=O)-c4cn(C)c(=O)c6[nH]cc(c46)CN5c4ncc(F)cc4F)no3)C(C)C)=NC2=O)cc1
C54H56F2N10O9S2
1091.233000
SDAVNUYOWAVNNJ-XSANQGJXSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536281; PubChem:CID163407791
Local ready
Direct docking supported
E3L023745
BDB023745
US11242344, Example 1003.1
CC/C(=C(\c1ccc(O)cc1)c1ccc(OCCN(C)C(=O)CCCOCCOc2cc([C@H](C(=O)N3C[C@H](O)C[C@H]3C3=NC(=O)[C@](C)(c4ccc(-c5scnc5C)cc4)N3)C(C)C)on2)cc1)c1ccccc1
C57H64N6O9S
1009.239000
YNNSZAHUAIODTC-HJTABLSOSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536283; PubChem:CID161964412
Local ready
Direct docking supported
E3L023746
BDB023746
US11242344, Example 118.1
Cc1ncsc1-c1ccc([C@]2(C)NC(C3C[C@@H](O)CN3C(=O)C(c3cn(C)nn3)C(C)C)=NC2=O)cc1
C26H31N7O3S
521.647000
ZXSIYBHMUJKMEO-GFWDKJHQSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536284; PubChem:CID142572548
Local ready
Direct docking supported
E3L023747
BDB023747
US11242344, Example 1003.2
CC/C(=C(\c1ccc(O)cc1)c1ccc(OCCN(C)C(=O)CCCOCCOc2cc([C@H](C(=O)N3C[C@H](O)C[C@@H]3C3=NC(=O)[C@](C)(c4ccc(-c5scnc5C)cc4)N3)C(C)C)on2)cc1)c1ccccc1
C57H64N6O9S
1009.239000
YNNSZAHUAIODTC-FHSUYOSUSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536285; PubChem:CID161964411
Local ready
Direct docking supported
E3L023748
BDB023748
US11242344, Example 1003.3
CC/C(=C(\c1ccc(O)cc1)c1ccc(OCCN(C)C(=O)CCCOCCOc2cc([C@@H](C(=O)N3C[C@H](O)C[C@H]3C3=NC(=O)[C@](C)(c4ccc(-c5scnc5C)cc4)N3)C(C)C)on2)cc1)c1ccccc1
C57H64N6O9S
1009.239000
YNNSZAHUAIODTC-SZPJVTDJSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536287; PubChem:CID142572698
Local ready
Direct docking supported
E3L023749
BDB023749
US11242344, Example 1003.4
CC/C(=C(\c1ccc(O)cc1)c1ccc(OCCN(C)C(=O)CCCOCCOc2cc([C@@H](C(=O)N3C[C@H](O)C[C@@H]3C3=NC(=O)[C@](C)(c4ccc(-c5scnc5C)cc4)N3)C(C)C)on2)cc1)c1ccccc1
C57H64N6O9S
1009.239000
YNNSZAHUAIODTC-HTCPFQGRSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536289; PubChem:CID142572591
Local ready
Direct docking supported
E3L023750
BDB023750
US11242344, Example 1004.1
C#Cc1cccc(Nc2ncnc3cc(OCCOC)c(OCCOCC#CC#CCOc4cc([C@H](C(=O)N5C[C@H](O)C[C@H]5C5=NC(=O)[C@](C)(c6ccc(-c7scnc7C)cc6)N5)C(C)C)on4)cc23)c1
C53H52N8O9S
977.113000
GDUPOTCODJXPBK-FZCWASTKSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536291; PubChem:CID158226001
Local ready
Direct docking supported
E3L023751
BDB023751
US11242344, Example 119.1
Cc1cc(C(C(=O)N2C[C@H](O)CC2C2=NC(=O)[C@](C)(c3ccc(-c4scnc4C)cc3)N2)C(C)C)sn1
C27H31N5O3S2
537.711000
MYIXYADVBFWYDM-OURBLFPKSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536292; PubChem:CID142572578
Local ready
Direct docking supported
E3L023752
BDB023752
US11242344, Example 1004.2
C#Cc1cccc(Nc2ncnc3cc(OCCOC)c(OCCOCC#CC#CCOc4cc([C@H](C(=O)N5C[C@H](O)C[C@@H]5C5=NC(=O)[C@](C)(c6ccc(-c7scnc7C)cc6)N5)C(C)C)on4)cc23)c1
C53H52N8O9S
977.113000
GDUPOTCODJXPBK-MHHUAASLSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536293; PubChem:CID158226004
Local ready
Direct docking supported
E3L023753
BDB023753
US11242344, Example 1004.3
C#Cc1cccc(Nc2ncnc3cc(OCCOC)c(OCCOCC#CC#CCOc4cc([C@@H](C(=O)N5C[C@H](O)C[C@H]5C5=NC(=O)[C@](C)(c6ccc(-c7scnc7C)cc6)N5)C(C)C)on4)cc23)c1
C53H52N8O9S
977.113000
GDUPOTCODJXPBK-IKOGVKPPSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536295; PubChem:CID158226002
Local ready
Direct docking supported
E3L023754
BDB023754
US11242344, Example 1004.4
C#Cc1cccc(Nc2ncnc3cc(OCCOC)c(OCCOCC#CC#CCOc4cc([C@@H](C(=O)N5C[C@H](O)C[C@@H]5C5=NC(=O)[C@](C)(c6ccc(-c7scnc7C)cc6)N5)C(C)C)on4)cc23)c1
C53H52N8O9S
977.113000
GDUPOTCODJXPBK-JTZWRRJCSA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536297; PubChem:CID158226003
Local ready
Direct docking supported
E3L023755
BDB023755
US11242344, Example 1005.1
Cc1ncsc1-c1ccc([C@]2(C)NC([C@@H]3C[C@@H](O)CN3C(=O)[C@@H](NC(=O)CCCCCCCCCCNC(=O)c3cc4c(cc3CS(C)(=O)=O)-c3cn(C)c(=O)c5[nH]cc(c35)CN4c3ncc(F)cc3F)C(C)(C)C)=NC2=O)cc1
C58H68F2N10O8S2
1135.374000
HHQFIKPEYIINFS-BXRAFSRASA-N P40337, Q15369, Q15370 von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM536299; PubChem:CID142572383
Local ready
Direct docking supported
E3L023756
BDB023756
BDBM536422
C[C@H]1CN(C)CCN1c1cc(NC(=O)Cn2cc(-c3cc(C(N)=O)c(O)c(F)c3F)c3c(=O)n4c(nc32)CCC4)c(Cl)c(F)n1
C29H28ClF3N8O4
645.042000
LGAFZGSECXDYIR-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM536422
Local ready
Direct docking supported
E3L023757
BDB023757
BDBM536423
C[C@H]1COCCN1c1cc(NC(=O)Cn2cc(-c3cc(Cl)c(O)c(C(N)=O)c3)c3c(=O)n4c(nc32)CCC4)c(Cl)cn1
C28H27Cl2N7O5
612.474000
PTZIPKBVSWCPSC-AWEZNQCLSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM536423
Local ready
Direct docking supported
E3L023758
BDB023758
BDBM536424
C[C@H]1COCCN1c1cc(NC(=O)Cn2cc(-c3cc(C(N)=O)c(O)c(F)c3F)c3c(=O)n4c(nc32)CCC4)c(Cl)cn1
C28H26ClF2N7O5
614.009000
MBLMLNTUJWHBSJ-ZDUSSCGKSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM536424
Local ready
Direct docking supported
E3L023759
BDB023759
BDBM536425
C[C@H]1CN(C)CCN1c1cc(NC(=O)Cn2cc(-c3cc(C(N)=O)c(O)c(F)c3F)c3c(=O)n4c(nc32)CCC4)c(Cl)cn1
C29H29ClF2N8O4
627.052000
UPWACBOVNACRFH-AWEZNQCLSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM536425
Local ready
Direct docking supported
E3L023760
BDB023760
BDBM536426
C[C@H]1COCCN1c1cc(NC(=O)Cn2cc(-c3cc(C(N)=O)c(O)c(F)c3F)c3c(=O)n4c(nc32)CCC4)c(Cl)c(F)n1
C28H25ClF3N7O5
631.999000
GYAXGYBIYNGRAF-LBPRGKRZSA-N P41182 B-cell lymphoma 6 protein
BindingDB
BindingDB:BDBM536426
Local ready
Direct docking supported