E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L028441
BDB028441
BDBM579089
Cn1ncc(-c2ccc3c(=O)[nH]nc(CNC(=O)OC(C)(C)C)c3c2)c1-c1ccc2c(Cl)cccc2c1C#N
C29H25ClN6O3
541.011000
QFOQQGOEWOQSIK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579089; PubChem:CID156151709
Local ready
Direct docking supported
E3L028442
BDB028442
BDBM579090
COc1ccc(-c2c(-c3ccc4c(=O)[nH]nc(CN)c4c3)cnn2C)c(C#N)c1Cl
C21H17ClN6O2
420.860000
DLBAQCQGWUYRSB-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579090; PubChem:CID156151397
Local ready
Direct docking supported
E3L028443
BDB028443
BDBM579091
CC(C)(C)OC(=O)NCc1n[nH]c(=O)c2ccc(B3OC(C)(C)C(C)(C)O3)cc12
C20H28BN3O5
401.272000
BCTQUSMZZJDYEI-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579091; PubChem:CID156651183
Local ready
Direct docking supported
E3L028444
BDB028444
BDBM579092
CN(C)c1c(-c2ccc3c(=O)[nH]nc(CN)c3c2)cnn1C
C15H18N6O
298.350000
WWBZQSIWHKQKMV-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579092; PubChem:CID156159675
Local ready
Direct docking supported
E3L028445
BDB028445
BDBM579093
Cc1c(-c2cnn(C)c2)ccc(-c2c(-c3ccc4c(=O)[nH]nc(CNC(=O)OC(C)(C)C)c4c3)cnn2C)c1C#N
C30H30N8O3
550.623000
XBFZVMANNBNACK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579093; PubChem:CID156159798
Local ready
Direct docking supported
E3L028446
BDB028446
BDBM579094
CCOc1ccc(-c2c(-c3ccc4c(=O)[nH]nc(CN)c4c3)cnn2C)c(C#N)c1
C22H20N6O2
400.442000
LDANHHGYWPCTGJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579094; PubChem:CID156151834
Local ready
Direct docking supported
E3L028447
BDB028447
BDBM579095
Cc1cc(C2CC2)cc(-c2c(-c3ccc4c(=O)[nH]nc(CNC(=O)OC(C)(C)C)c4c3)cnn2C)c1C#N
C29H30N6O3
510.598000
PPGLPAFNRQHLTQ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579095; PubChem:CID156151285
Local ready
Direct docking supported
E3L028448
BDB028448
BDBM579096
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1OCc1c(Cl)cccc1C#N
C21H17ClN6O2
420.860000
MTKHMIBHCPLURH-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579096; PubChem:CID156151115
Local ready
Direct docking supported
E3L028449
BDB028449
BDBM579097
O=C1c2ccccc2C(=O)N1Cc1n[nH]c(=O)c2ccc(-c3cncc(C4CCCCC4)c3)cc12
C28H24N4O3
464.525000
BWMQKHQUPRGOJN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579097; PubChem:CID156151513
Local ready
Direct docking supported
E3L028450
BDB028450
BDBM579098
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1cccc(OC2CC2)c1C#N
C23H20N6O2
412.453000
WURTURAULAGILZ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579098; PubChem:CID156151606
Local ready
Direct docking supported
E3L028451
BDB028451
BDBM579099
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1c(F)cc2ccccc2c1C#N
C24H17FN6O
424.439000
BPTYWAYMKBEXES-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579099; PubChem:CID156151804
Local ready
Direct docking supported
E3L028452
BDB028452
BDBM579100
CC(C)Oc1cccc(-c2c(-c3ccc4c(=O)[nH]nc(CN)c4c3)cnn2C)c1C#N
C23H22N6O2
414.469000
IWIVBYJZOABJOY-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579100; PubChem:CID156151841
Local ready
Direct docking supported
E3L028453
BDB028453
BDBM579101
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1c(F)cc2ccccc2c1C#N
C24H17FN6O
424.439000
BPTYWAYMKBEXES-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579101; PubChem:CID156151804
Local ready
Direct docking supported
E3L028454
BDB028454
BDBM579102
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1cccc(OC2CCC2)c1C#N
C24H22N6O2
426.480000
QHAOFEZJJQTOND-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579102; PubChem:CID156151460
Local ready
Direct docking supported
E3L028455
BDB028455
BDBM579103
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1c(C#N)cc2ccccc2c1Cl
C24H17ClN6O
440.894000
UXJXKCCDLCZSSR-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579103; PubChem:CID156151523
Local ready
Direct docking supported
E3L028456
BDB028456
Mrtx-1719
Cn1ncc(-c2ccc3c(=O)[nH]nc(CN)c3c2)c1-c1c(F)c(Cl)cc(OC2CC2)c1C#N
C23H18ClFN6O2
464.888000
BZKIOORWZAXIBA-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579105; PubChem:CID156151242
Local ready
Direct docking supported
E3L028457
BDB028457
US11485731, Example 1A
O=C(NCC(O)CN1CCc2ccccc2C1)N1CCC(c2ccccc2)C1
C23H29N3O2
379.504000
OXVBBRWSEVODQY-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579825; PubChem:CID142428279
Local ready
Direct docking supported
E3L028458
BDB028458
US11485731, Example 1B
CC(=O)N1CCN(C(=O)NCC(O)CN2CCc3ccccc3C2)CC1
C19H28N4O3
360.458000
SSAICJGODGDTLW-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579829; PubChem:CID142428352
Local ready
Direct docking supported
E3L028459
BDB028459
US11485731, Example 1C
O=C(NCC(O)CN1CCc2ccccc2C1)N1CCN(c2ccccc2)CC1
C23H30N4O2
394.519000
XFGROBBZTZGDFL-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579833; PubChem:CID142428258
Local ready
Direct docking supported
E3L028460
BDB028460
US11485731, Example 1D
O=C(NCC(O)CN1CCc2ccccc2C1)N1CCN(Cc2ccccc2)CC1
C24H32N4O2
408.546000
LKCJCEHYCFIMJX-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM579835; PubChem:CID142428347
Local ready
Direct docking supported