E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L028841
BDB028841
BDBM581818
Cc1coc(-c2ccnc(SC3CCC(=O)NC3=O)c2)n1
C14H13N3O3S
303.343000
NDPVVGVYTIFGKQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581818; PubChem:CID142623367
Local ready
Direct docking supported
E3L028842
BDB028842
BDBM581819
O=C1CCC(Sc2cc(-c3nn[nH]n3)ccn2)C(=O)N1
C11H10N6O2S
290.308000
XJLFTIQMZBSNPF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581819; PubChem:CID142623342
Local ready
Direct docking supported
E3L028843
BDB028843
BDBM581820
NC(=O)c1cccnc1SC1CCC(=O)NC1=O
C11H11N3O3S
265.294000
QPMLSNIVNUFWQR-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581820; PubChem:CID142623402
Local ready
Direct docking supported
E3L028844
BDB028844
BDBM581821
CN(C)C(=O)c1cccnc1SC1CCC(=O)NC1=O
C13H15N3O3S
293.348000
VGFAOFKRNIVKQJ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581821; PubChem:CID142623400
Local ready
Direct docking supported
E3L028845
BDB028845
BDBM581823
COCCOCCNC(=O)c1cccnc1SC1CCC(=O)NC1=O
C16H21N3O5S
367.427000
FITGWZNXNVDZSH-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581823; PubChem:CID155261447
Local ready
Direct docking supported
E3L028846
BDB028846
BDBM581824
Cn1cccc(N2CCC(=O)NC2=O)c1=O
C10H11N3O3
221.216000
PVLHPRSYUHGTIR-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581824; PubChem:CID155261434
Local ready
Direct docking supported
E3L028847
BDB028847
1-(1-Methyl-2-oxoquinolin-3-yl)-1,3-diazinane-2,4-dione
Cn1c(=O)c(N2CCC(=O)NC2=O)cc2ccccc21
C14H13N3O3
271.276000
WSQJRKFENJVGGL-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581825; PubChem:CID142623298
Local ready
Direct docking supported
E3L028848
BDB028848
BDBM581826
CN1Cc2ccccc2C(N2CCC(=O)NC2=O)C1=O
C14H15N3O3
273.292000
XSPVHBXDVCKLDS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581826; PubChem:CID142623290
Local ready
Direct docking supported
E3L028849
BDB028849
BDBM581827
Cn1cc2ccccc2c(N2CCC(=O)NC2=O)c1=O
C14H13N3O3
271.276000
NDYRBPSULNLIQJ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM581827; PubChem:CID142623348
Local ready
Direct docking supported
E3L028850
BDB028850
US11512083, Example 22
CSCC(NC(=O)CCC(C)C)C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1
C26H36N4O4S2
532.732000
VDESLTPJMGJHJZ-QFMSAKRMSA-N P40337, P62877, Q13617 Cullin-2
BindingDB, PubChem
BindingDB:BDBM581845; PubChem:CID122529010
Local ready
Direct docking supported
E3L028851
BDB028851
US11512083, Example 70
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)c2ccccc2C#N)C(C)(C)C)cc1
C30H33N5O4S
559.692000
NUVIGPMXWRQLFN-KTIWRFAQSA-N P40337, P62877, Q13617 Cullin-2
BindingDB, PubChem
BindingDB:BDBM581891; PubChem:CID122529076
Local ready
Direct docking supported
E3L028852
BDB028852
US11512083, Example 75
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C2CCN(C)CC2)C(C)(C)C)cc1
C29H41N5O4S
555.745000
SAXJAVQZJAJIMR-GIFXNVAJSA-N P40337, P62877, Q13617 Cullin-2
BindingDB, PubChem
BindingDB:BDBM581896; PubChem:CID122529030
Local ready
Direct docking supported
E3L028853
BDB028853
WO2023001061, Example 1
CC(C)c1cnn2c(NCc3ccccc3N(C)C)cc(OC3CCN(C)CC3)nc12
C24H34N6O
422.577000
JCOZOIXEEPDWEC-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581943; PubChem:CID166594722
Local ready
Direct docking supported
E3L028854
BDB028854
US11512083, Example 110
Cc1ncsc1-c1ccc(CNC(=S)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3ccccc3C2=O)cc1
C29H32N4O3S2
548.734000
UKCWLXITAYZISN-VJTSUQJLSA-N P40337, P62877, Q13617 Cullin-2
BindingDB, PubChem
BindingDB:BDBM581946; PubChem:CID122529162
Local ready
Direct docking supported
E3L028855
BDB028855
WO2023001061, Example 2
CC(C)c1cnn2c(NCC3CCCN3C)cc(NC[C@H]3CCNC[C@@H]3O)nc12
C21H35N7O
401.559000
QQLSIJHLYVKUPE-AGPBCMBSSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581947; PubChem:CID166594725
Local ready
Direct docking supported
E3L028856
BDB028856
WO2023001061, Example 4
CC(C)c1cnn2c(NCc3nc4cc(N(C)C)ccc4s3)cc(NC[C@H]3CCNC[C@@H]3O)nc12
C25H34N8OS
494.669000
NXRKFXLYXYGWNQ-UZLBHIALSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581954; PubChem:CID166594732
Local ready
Direct docking supported
E3L028857
BDB028857
WO2023001061, Example 5
CC(C)c1cnn2c(NCc3ccc4cccc(N(C)C)c4n3)cc(NC[C@H]3CCNC[C@@H]3O)nc12
C27H36N8O
488.640000
SKBSWOBKDUUYNC-XXBNENTESA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581955; PubChem:CID166594733
Local ready
Direct docking supported
E3L028858
BDB028858
WO2023001061, Example 6
CC(C)c1cnn2c(NCc3ccnn3C)cc(NC[C@H]3CCNC[C@@H]3O)nc12
C20H30N8O
398.515000
ZLSKNJNVHQBNSQ-PBHICJAKSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581956; PubChem:CID166594734
Local ready
Direct docking supported
E3L028859
BDB028859
WO2023001061, Example 7
CC(C)c1cnn2c(NCc3ccnn3C)cc(OC3CCN(C)CC3)nc12
C20H29N7O
383.500000
IPIBQKDBYRSOMN-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581957; PubChem:CID166594735
Local ready
Direct docking supported
E3L028860
BDB028860
WO2023001061, Example 8
CC(C)c1cnn2c(NCC3CCCN3C)cc(OC3CCN(C)CC3)nc12
C21H34N6O
386.544000
AZQXMHJPBLALOY-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM581958; PubChem:CID166594736
Local ready
Direct docking supported