E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L003201
BDB003201
BDBM59502
CN(CC(=O)O)c1ccc(C(F)(F)F)cc1[N+](=O)[O-]
C10H9F3N2O4
278.186000
KNIKUGYZTHXKJS-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59502; PubChem:CID3830553
Local ready
Direct docking supported
E3L003202
BDB003202
1-(2-Phenyl-1,3-thiazol-5-yl)ethan-1-one
CC(=O)c1cnc(-c2ccccc2)s1
C11H9NOS
203.266000
QAJAPTFQPWENFK-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59503; PubChem:CID608996
Local ready
Direct docking supported
E3L003203
BDB003203
BDBM59504
COc1ccccc1CNC(=O)COC(=O)Cc1ccsc1
C16H17NO4S
319.382000
DMPXEWVLIXRXQG-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59504; PubChem:CID2338176
Local ready
Direct docking supported
E3L003204
BDB003204
BDBM59505
Cc1ccc(NC(=O)CNC2CCS(=O)(=O)C2)cc1C
C14H20N2O3S
296.392000
XHEGZUCNHFQTIR-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59505; PubChem:CID4839937
Local ready
Direct docking supported
E3L003205
BDB003205
BDBM59506
CC1CN(S(=O)(=O)c2cccc(C(=O)Nc3ccc(S(=O)(=O)Nc4ncccn4)cc3)c2)CC(C)O1
C23H25N5O6S2
531.616000
WVKQFLWNDASKSL-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59506; PubChem:CID4159660
Local ready
Direct docking supported
E3L003206
BDB003206
BDBM59507
CCOC(=O)NN=Cc1ccc(Oc2ccccc2)cc1
C16H16N2O3
284.315000
PGRGHDKSKHFSFM-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM59507
Local ready
Direct docking supported
E3L003207
BDB003207
3-(N-benzyl2-chlorobenzenesulfonamido)propanoic acid
O=C(O)CCN(Cc1ccccc1)S(=O)(=O)c1ccccc1Cl
C16H16ClNO4S
353.827000
IKPUNQUHOKQUQZ-UHFFFAOYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM59508; PubChem:CID2443720
Local ready
Direct docking supported
E3L003208
BDB003208
BDBM59553
Cc1[nH]n(-c2ccccc2)c(=O)c1C=NNC(=O)c1cccc(F)c1
C18H15FN4O2
338.342000
ZSOBICZDUUBZED-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM59553; PubChem:CID692680
Local ready
Direct docking supported
E3L003209
BDB003209
2-nitro-N-(quinolin-8-yl)benzenesulfonamide
O=[N+]([O-])c1ccccc1S(=O)(=O)Nc1cccc2cccnc12
C15H11N3O4S
329.337000
YCXUFEOBLVZNAP-UHFFFAOYSA-N O15151, Q99728 BRCA1-associated RING domain protein 1, Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM60287; PubChem:CID739449
Local ready
Direct docking supported
E3L003210
BDB003210
BDBM60367
COc1cc(-c2c(C#N)c(=O)[nH]c3c2c(C)nn3-c2ccccc2)ccc1O
C21H16N4O3
372.384000
YMXCONZIDIDWFJ-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM60367; PubChem:CID135513636
Local ready
Direct docking supported
E3L003211
BDB003211
US9073917, 3-comparative
CCc1[nH]cc2c1NC1=C(C(=O)CCC1)[C@@H]2c1cccc(Oc2nc3ccccc3[nH]2)c1
C26H24N4O2
424.504000
BRXHKUKMMZTVRE-HSZRJFAPSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM60452; PubChem:CID119057309
Local ready
Direct docking supported
E3L003212
BDB003212
BDBM60492
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC2CCC(O)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(F)c(F)cc12
C29H33ClF3N3O3
564.048000
CPVLFAPAIXRGNV-FJEPLBHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM60492; PubChem:CID52938609
Local ready
Direct docking supported
E3L003213
BDB003213
BDBM60494
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC2CCC(O)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(F)ccc12
C29H34ClF2N3O3
546.058000
WOBLKIIJUYHOLE-YJRDPZTCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM60494; PubChem:CID52938610
Local ready
Direct docking supported
E3L003214
BDB003214
BDBM60495
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC2CCC(OC(=O)[C@H](Cc3ccccc3)NC(=O)OC(C)(C)C)CC2)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C43H50Cl2F2N4O6
827.797000
SJZZHUDRDGTEMW-KYGSIEARSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM60495
Local ready
Direct docking supported
E3L003215
BDB003215
US9079913, MI-716C
O=C(NCC[C@H](O)CO)[C@@H]1N[C@H](CC2CCCCC2)[C@]2(C(=O)Nc3cc(Cl)c(F)cc32)[C@H]1c1cccc(Cl)c1
C29H34Cl2FN3O4
578.512000
RBOPWYQIRWGZGJ-SYRIZIHISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM60496; PubChem:CID69927413
Local ready
Direct docking supported
E3L003216
BDB003216
US9079913, MI-708A
CN1[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]2(C(=O)Nc3cc(Cl)c(F)cc32)[C@H]1CC(C)(C)C
C28H34Cl2FN3O4
566.501000
YHCMMEGWFITJQH-FKUBJEGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM60498; PubChem:CID69926708
Local ready
Direct docking supported
E3L003217
BDB003217
BDBM60500
CN1[C@@H](C(=O)NCC[C@@H](O)CO)[C@H](c2cccc(Cl)c2F)[C@@]2(C(=O)Nc3cc(F)c(F)cc32)[C@H]1CC(C)(C)C
C28H33ClF3N3O4
568.036000
NCVZNOICJNGHGC-AXSIKVPYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM60500
Local ready
Direct docking supported
E3L003218
BDB003218
Sgx-523
Cn1cc(-c2ccc3nnc(Sc4ccc5ncccc5c4)n3n2)cn1
C18H13N7S
359.418000
BCZUAADEACICHN-UHFFFAOYSA-N O14965, O95835, P51617, Q13233, Q92630 Interleukin-1 receptor-associated kinase 1, Aurora kinase A, Dual specificity tyrosine-phosphorylation-regulated kinase 2, Serine/threonine-protein kinase LATS1, Mitogen-activated protein kinase kinase kinase 1
BindingDB, PubChem
BindingDB:BDBM60589; PubChem:CID24779724
Local ready
Direct docking supported
E3L003219
BDB003219
Tamatinib
COc1cc(Nc2ncc(F)c(Nc3ccc4c(n3)NC(=O)C(C)(C)O4)n2)cc(OC)c1OC
C22H23FN6O5
470.461000
NHHQJBCNYHBUSI-UHFFFAOYSA-N O14965, O95835, P51617, Q13233, Q92630 Serine/threonine-protein kinase LATS1, Dual specificity tyrosine-phosphorylation-regulated kinase 2, Mitogen-activated protein kinase kinase kinase 1, Interleukin-1 receptor-associated kinase 1, Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM60665; PubChem:CID11213558
Local ready
Direct docking supported
E3L003220
BDB003220
Gsk-J1
O=C(O)CCNc1cc(N2CCc3ccccc3CC2)nc(-c2ccccn2)n1
C22H23N5O2
389.459000
AVZCPICCWKMZDT-UHFFFAOYSA-N P29375, P41229, Q8NHM5, Q9BY66 Lysine-specific demethylase 5D, Lysine-specific demethylase 5C, Lysine-specific demethylase 5A, Lysine-specific demethylase 2B
BindingDB, PubChem
BindingDB:BDBM60875; PubChem:CID56963315
Local ready
Direct docking supported