E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L003301
BDB003301
BDBM67655
CCCCCCCCCCOC(=O)Cn1c(COc2ccc(Cl)cc2)[n+](C)c2ccccc21
C27H36ClN2O3+
472.049000
ABSUVJKECLPASA-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM67655; PubChem:CID3800684
Local ready
Direct docking supported
E3L003302
BDB003302
Mitoxantrone
O=C1c2c(O)ccc(O)c2C(=O)c2c(NCCNCCO)ccc(NCCNCCO)c21
C22H28N4O6
444.488000
KKZJGLLVHKMTCM-UHFFFAOYSA-N P29372 DNA-3-methyladenine glycosylase
BindingDB, PubChem
BindingDB:BDBM67690; PubChem:CID4212
Local ready
Direct docking supported
E3L003303
BDB003303
BDBM67836
O=C1c2ccccc2C(=O)c2c1oc(C(F)(F)F)c2C(=O)c1ccccc1
C20H9F3O4
370.282000
ULQVKUHBMBQQPE-UHFFFAOYSA-N O14727 Apoptotic protease-activating factor 1
BindingDB, PubChem
BindingDB:BDBM67836; PubChem:CID1207959
Local ready
Direct docking supported
E3L003304
BDB003304
US12486251, Example 18
CNC(=O)c1cc2ccc(C3=CCOC3)cc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H27F2N5O2
515.564000
GRZVAJLMSBSNPH-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68332; PubChem:CID167524069
Local ready
Direct docking supported
E3L003305
BDB003305
US12486251, Example 19
CNC(=O)c1cc2ccc(C3CCOC3)cc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H29F2N5O2
517.580000
PBDPVQFPMJBIDJ-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68333; PubChem:CID167524056
Local ready
Direct docking supported
E3L003306
BDB003306
US12486251, Example 20
CNC(=O)c1cc2cc(C3=CCOCC3)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C30H29F2N5O2
529.591000
VELFXWDONODCHW-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68334; PubChem:CID167524035
Local ready
Direct docking supported
E3L003307
BDB003307
US12486251, Example 21
CNC(=O)c1cc2cc(C3CCOCC3)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C30H31F2N5O2
531.607000
SIRSZRUHCPCCQM-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68335; PubChem:CID167524036
Local ready
Direct docking supported
E3L003308
BDB003308
US12486251, Example 22
CNC(=O)c1cc2cc(C3=CCOC3)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H27F2N5O2
515.564000
MGKWUOVUAOESBU-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68336; PubChem:CID167524055
Local ready
Direct docking supported
E3L003309
BDB003309
US12486251, Example 23
CNC(=O)c1cc2cc(C3CCOC3)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H29F2N5O2
517.580000
GRWJTUYCMQFQIR-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68337; PubChem:CID167524072
Local ready
Direct docking supported
E3L003310
BDB003310
US12486251, Example 24
CNC(=O)c1cc2ccc(N3CCOC3=O)cc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C28H26F2N6O3
532.551000
DTZHJIZKUUXWDF-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM68338; PubChem:CID166806601
Local ready
Direct docking supported
E3L003311
BDB003311
US12486251, Example 25
CNC(=O)c1cc2cc(N3CCOC3=O)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C28H26F2N6O3
532.551000
PLOKHNOTINQZET-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70191; PubChem:CID167524053
Local ready
Direct docking supported
E3L003312
BDB003312
US12486251, Example 26
CNC(=O)c1cc2cc(N3CCCS3(=O)=O)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C28H28F2N6O3S
566.634000
QQDLNXBOGWTBNQ-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70192; PubChem:CID169842869
Local ready
Direct docking supported
E3L003313
BDB003313
CBP/p300-IN-14
CNC(=O)c1cc2cc(N3CCN(C)CC3=O)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C30H31F2N7O2
559.621000
KCXFRDAUFBFNJG-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70193; PubChem:CID163198545
Local ready
Direct docking supported
E3L003314
BDB003314
US12486251, Example 28
CNC(=O)c1cc2cc(N3CCOCC3=O)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H28F2N6O3
546.578000
BYRDQANOLQYNCH-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70194; PubChem:CID167524068
Local ready
Direct docking supported
E3L003315
BDB003315
US12486251, Example 29
CNC(=O)c1cc2cc(C3CCCO3)ccc2c(N2CCCc3cc(-c4cnn(C)c4)c(C(F)F)cc32)n1
C29H29F2N5O2
517.580000
ZKNOVOSCADGCSR-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70195; PubChem:CID167524034
Local ready
Direct docking supported
E3L003316
BDB003316
US12486251, Example 30
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cncnc4)c(C(F)F)cc32)n1
C25H21F2N5O
445.473000
UONLYLNXRZVIIZ-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70196; PubChem:CID166806600
Local ready
Direct docking supported
E3L003317
BDB003317
US12486251, Example 31
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(C4=CCOCC4)c(C(F)F)cc32)n1
C26H25F2N3O2
449.501000
MYHSVXPVKLESGH-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70197; PubChem:CID167524058
Local ready
Direct docking supported
E3L003318
BDB003318
US12486251, Example 32
CCn1cc(-c2cc3c(cc2C(F)F)N(c2nc(C(=O)NC)cc4ccccc24)CCC3)cn1
C26H25F2N5O
461.516000
MUOPKSNBBFXQOT-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70198; PubChem:CID167524064
Local ready
Direct docking supported
E3L003319
BDB003319
US12486251, Example 33
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4cnn(C5CC5)c4)c(C(F)F)cc32)n1
C27H25F2N5O
473.527000
GUSFYJFANFYUQR-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70199; PubChem:CID167524037
Local ready
Direct docking supported
E3L003320
BDB003320
US12486251, Example 34
CNC(=O)c1cc2ccccc2c(N2CCCc3cc(-c4ccn(C)n4)c(C(F)F)cc32)n1
C25H23F2N5O
447.489000
IDLRNIFVSXHIRT-UHFFFAOYSA-N Q92793 CREB-binding protein
BindingDB, PubChem
BindingDB:BDBM70200; PubChem:CID167524041
Local ready
Direct docking supported