E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L039541
BDB039541
BDBM756538
CC1CN(Cc2cccc(-c3cnn(C)c3)c2)CCC12COc1c2ccc2c1CN(C1CCC(=O)NC1=O)C2=O
C31H33N5O4
539.636000
QEUAXMWPQSKZGW-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756538; PubChem:CID169201362
Local ready
Direct docking supported
E3L039542
BDB039542
BDBM756540
O=C1CCC(N2Cc3c(ccc4c3OCC43CCN(Cc4ccccc4)CC3F)C2=O)C(=O)N1
C26H26FN3O4
463.509000
AGSHKVBITCPTLU-UHFFFAOYSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756540; PubChem:CID169201426
Local ready
Direct docking supported
E3L039543
BDB039543
BDBM756541
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4ccc5c(c4)CC(=O)N5)CC3(F)F)C2=O)C(=O)N1
C28H26F2N4O5
536.535000
VVPHDNRZNIZGPS-LWAJAQLZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756541; PubChem:CID169201021
Local ready
Direct docking supported
E3L039544
BDB039544
BDBM756542
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4cnn(S(=O)(=O)c5ccccc5Cl)c4)CC3(F)F)C2=O)C(=O)N1
C29H26ClF2N5O6S
646.072000
PVCYTIDXBZTJFO-XYXHBKGXSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756542; PubChem:CID169201357
Local ready
Direct docking supported
E3L039545
BDB039545
BDBM756543
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4cnn(-c5ccc(Cl)cc5)c4)CC3(F)F)C2=O)C(=O)N1
C29H26ClF2N5O4
582.007000
NACIRLLPBBQLHE-UHFKCPIBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756543; PubChem:CID169201046
Local ready
Direct docking supported
E3L039546
BDB039546
BDBM756544
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4ccc5c(c4)C(=O)NC5)CC3(F)F)C2=O)C(=O)N1
C28H26F2N4O5
536.535000
UMAKAQANPAFFCV-LWAJAQLZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756544; PubChem:CID169201130
Local ready
Direct docking supported
E3L039547
BDB039547
BDBM756545
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4cccc(-c5cnn(C6COC6)c5)c4)CC3(F)F)C2=O)C(=O)N1
C32H31F2N5O5
603.626000
RHDIVMCHRCZEIJ-PAMMARIWSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756545; PubChem:CID169201176
Local ready
Direct docking supported
E3L039548
BDB039548
BDBM756546
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4ccc5cn[nH]c5c4)CC3(F)F)C2=O)C(=O)N1
C27H25F2N5O4
521.524000
BIQMYDRWYHNKBI-GVNKFJBHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756546; PubChem:CID169201420
Local ready
Direct docking supported
E3L039549
BDB039549
BDBM756547
Cn1ncc2ccc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)cc21
C28H27F2N5O4
535.551000
JFGMFJYMHFOKDC-LWAJAQLZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756547; PubChem:CID169201282
Local ready
Direct docking supported
E3L039550
BDB039550
BDBM756548
Cn1cc2ccc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)cc2n1
C28H27F2N5O4
535.551000
JEHRRHZSAUHXOB-YMQLSTQVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756548; PubChem:CID169201216
Local ready
Direct docking supported
E3L039551
BDB039551
BDBM756549
Cn1cc2cccc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)c2n1
C28H27F2N5O4
535.551000
CKCQVEFPZWMOIZ-LWAJAQLZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756549; PubChem:CID169201385
Local ready
Direct docking supported
E3L039552
BDB039552
BDBM756550
Cn1cc2cc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)ccc2n1
C28H27F2N5O4
535.551000
HTLGQORUCKJOIY-YMQLSTQVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756550; PubChem:CID169201030
Local ready
Direct docking supported
E3L039553
BDB039553
BDBM756551
Cn1ncc2cc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)ccc21
C28H27F2N5O4
535.551000
MVNOGUMCLWQOEH-YMQLSTQVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756551; PubChem:CID169201440
Local ready
Direct docking supported
E3L039554
BDB039554
BDBM756552
Cn1cc(-c2cccc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)c2)cn1
C30H29F2N5O4
561.589000
NNEXECMHLRTZPN-CTLOQAHHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756552; PubChem:CID169201325
Local ready
Direct docking supported
E3L039555
BDB039555
BDBM756554
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4ccc5[nH]ncc5c4)CC3(F)F)C2=O)C(=O)N1
C27H25F2N5O4
521.524000
PHQKIZCUOOZENB-GVNKFJBHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756554; PubChem:CID169201096
Local ready
Direct docking supported
E3L039556
BDB039556
BDBM756555
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4cccc5[nH]ncc45)CC3(F)F)C2=O)C(=O)N1
C27H25F2N5O4
521.524000
ZLZPPHMRQIVBHX-GVNKFJBHSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756555; PubChem:CID169201091
Local ready
Direct docking supported
E3L039557
BDB039557
BDBM756556
Cn1cc2c(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)cccc2n1
C28H27F2N5O4
535.551000
BJZJREUQJJKWAC-YMQLSTQVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756556; PubChem:CID169201243
Local ready
Direct docking supported
E3L039558
BDB039558
BDBM756557
Cn1ncc2c(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)cccc21
C28H27F2N5O4
535.551000
VRHFEZPODCIFFE-YMQLSTQVSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756557; PubChem:CID169201404
Local ready
Direct docking supported
E3L039559
BDB039559
BDBM756558
O=C1CC[C@H](N2Cc3c(ccc4c3OCC43CCN(Cc4cccc5cn[nH]c45)CC3(F)F)C2=O)C(=O)N1
C27H25F2N5O4
521.524000
VTYXEEHOQCVELO-DQUNLGLBSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756558; PubChem:CID169201196
Local ready
Direct docking supported
E3L039560
BDB039560
BDBM756559
Cn1ncc2cccc(CN3CCC4(COc5c4ccc4c5CN([C@H]5CCC(=O)NC5=O)C4=O)C(F)(F)C3)c21
C28H27F2N5O4
535.551000
ZWPMNPGHRNAUNI-LWAJAQLZSA-N Q16531, Q96SW2 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM756559; PubChem:CID169201163
Local ready
Direct docking supported