E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L040821
BDB040821
BDBM765908
COc1c(N2CC(C)(Nc3nnc(-c4ccc(OC(F)(F)F)cc4)o3)C2)ccc(C2CCC(=O)NC2=O)c1F
C25H23F4N5O5
549.481000
BMWBNKJHFNLPSB-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765908; PubChem:CID171541366
Local ready
Direct docking supported
E3L040822
BDB040822
BDBM765909
O=C1CCC(c2c(F)cc(N3CC(NC(=O)OC45CC(C(=O)c6ccccc6)(C4)C5)C3)cc2F)C(=O)N1
C27H25F2N3O5
509.509000
XGUZWITYIMHDPA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765909; PubChem:CID171541247
Local ready
Direct docking supported
E3L040823
BDB040823
BDBM765910
CN(C(=O)N1CC(OC(=O)NC2CN(c3cc(F)c(C4CCC(=O)NC4=O)c(F)c3)C2)C1)c1ccc(Cl)cc1
C26H26ClF2N5O5
561.973000
SYHMXJVGXHSWAF-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765910; PubChem:CID171540880
Local ready
Direct docking supported
E3L040824
BDB040824
BDBM765911
COC12CC(c3nnc(N[C@H]4CN(c5cc(F)c(C6CCC(=O)NC6=O)c(F)c5)[C@@H]4C)o3)(C1)C2
C23H25F2N5O4
473.480000
OVHMMMSSADKXJT-RCWBWRNKSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765911; PubChem:CID171541248
Local ready
Direct docking supported
E3L040825
BDB040825
CDK2 degrader 6
C[C@@H]1[C@@H](Nc2nnc(C34CC(C(F)(F)F)(C3)C4)o2)CN1c1cc(F)c(C2CCC(=O)NC2=O)c(F)c1
C23H22F5N5O3
511.451000
DYUMYEGVQNMNAQ-SRJWQNMQSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765912; PubChem:CID171540804
Local ready
Direct docking supported
E3L040826
BDB040826
BDBM765913
C[C@@H]1[C@@H](Nc2nnc(-c3ccc(C(F)(F)F)cc3)o2)CN1c1cc(F)c(C2CCC(=O)NC2=O)c(F)c1
C24H20F5N5O3
521.446000
YUINRNLIHYNIEX-JYXGGTNWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765913; PubChem:CID171541283
Local ready
Direct docking supported
E3L040827
BDB040827
BDBM765914
C[C@@H]1[C@@H](Nc2nnc(C3CC4(CCC4)C3)o2)CN1c1cc(F)c(C2CCC(=O)NC2=O)c(F)c1
C24H27F2N5O3
471.508000
IATDMMGSZYXDGP-YOAWFHMFSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765914; PubChem:CID171541249
Local ready
Direct docking supported
E3L040828
BDB040828
BDBM765915
Cc1ccc(-c2nnc(N[C@H]3CN(c4cc(F)c(C5CCC(=O)NC5=O)c(F)c4)[C@@H]3C)o2)cc1
C24H23F2N5O3
467.476000
QBSNBWPPAUHZCL-LHQUYYRUSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765915; PubChem:CID171541354
Local ready
Direct docking supported
E3L040829
BDB040829
BDBM765916
C[C@@H]1[C@@H](Nc2nnc(-c3ccc(OC(F)(F)F)cc3)o2)CN1c1cc(F)c(C2CCC(=O)NC2=O)c(F)c1
C24H20F5N5O4
537.445000
BFXCITLRIAUJBZ-JYXGGTNWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM765916; PubChem:CID171541037
Local ready
Direct docking supported
E3L040830
BDB040830
BDBM767015
CC1(C)[C@@H]2CC[C@@]1(C)[C@@H](NCCCCCCCSc1cc(F)cc3c1CN(C1CCC(=O)NC1=O)C3=O)C2
C30H42FN3O3S
543.749000
VBLVITILMKOXIU-PCCFYNKWSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767015; PubChem:CID171064771
Local ready
Direct docking supported
E3L040831
BDB040831
BDBM767016
O=C1CCC(N2Cc3c(SCc4ccc(CN5CCCCC5)cc4)cc(F)cc3C2=O)C(=O)N1
C26H28FN3O3S
481.593000
YLWYDQGIZRNLGU-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767016; PubChem:CID171064776
Local ready
Direct docking supported
E3L040832
BDB040832
BDBM767017
CC1(C)[C@@H]2CC[C@@]1(C)[C@@H](NCc1ccc(CSc3cc(F)cc4c3CN(C3CCC(=O)NC3=O)C4=O)cc1)C2
C31H36FN3O3S
549.712000
ACWBKLJXCODPBH-HJYHPAORSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767017; PubChem:CID171064756
Local ready
Direct docking supported
E3L040833
BDB040833
BDBM767018
O=C1CCC(N2Cc3c(SCc4ccc(CN5CCC(F)(F)CC5)cc4)cc(F)cc3C2=O)C(=O)N1
C26H26F3N3O3S
517.573000
RZQCOUFHRBMYRP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767018; PubChem:CID171064718
Local ready
Direct docking supported
E3L040834
BDB040834
BDBM767019
O=C1CCC(N2Cc3c(SCc4ccc(CNC56CC7CC(CC(C7)C5)C6)cc4)cc(F)cc3C2=O)C(=O)N1
C31H34FN3O3S
547.696000
STEUXVAQXNBEHB-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767019; PubChem:CID171064802
Local ready
Direct docking supported
E3L040835
BDB040835
BDBM767020
O=C1CCC(N2Cc3c(SCCCCNC45CC6CC(CC(C6)C4)C5)cc(F)cc3C2=O)C(=O)N1
C27H34FN3O3S
499.652000
FOLIWBDPHQNZRP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767020; PubChem:CID171064742
Local ready
Direct docking supported
E3L040836
BDB040836
BDBM767021
O=C1CCC(N2Cc3c(SCCCCCCCNC4CC5(CCC5)C4)cc(F)cc3C2=O)C(=O)N1
C27H36FN3O3S
501.668000
LWEAQKHWAAUROQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767021; PubChem:CID171064716
Local ready
Direct docking supported
E3L040837
BDB040837
BDBM767022
O=C1CCC(N2Cc3c(SCCCCCCCCN4CCOCC4)cc(F)cc3C2=O)C(=O)N1
C25H34FN3O4S
491.629000
JCOBXKJQIZSWAM-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767022; PubChem:CID176049310
Local ready
Direct docking supported
E3L040838
BDB040838
BDBM767023
O=C1CCC(N2Cc3c(CCCCCCCCNC45CC6CC(CC(C6)C4)C5)cc(F)cc3C2=O)C(=O)N1
C31H42FN3O3
523.693000
LCKHISXQUARKIS-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767023; PubChem:CID171064759
Local ready
Direct docking supported
E3L040839
BDB040839
BDBM767024
CCN(CC)CCCCCCCCSc1cc(F)cc2c1CN(C1CCC(=O)NC1=O)C2=O
C25H36FN3O3S
477.646000
IZCSZHGYWCPWBH-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767024; PubChem:CID171064725
Local ready
Direct docking supported
E3L040840
BDB040840
BDBM767025
O=C1CCC(N2Cc3c(SCc4ccc(CN5CCC(F)(F)CC5)c(F)c4)cc(F)cc3C2=O)C(=O)N1
C26H25F4N3O3S
535.563000
FENGHDGRJVQDJA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM767025; PubChem:CID171064724
Local ready
Direct docking supported