E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041701
BDB041701
BDBM775315
C=C(CN1CCOCC1)C(=O)NCc1cccc([C@@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@H]2NC(=O)c2ccnn2C(F)(F)F)c1
C34H35F3N8O4
676.700000
TYOIWZQUEYYVMA-WDYNHAJCSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775315
Local ready
Direct docking supported
E3L041702
BDB041702
BDBM775316
C=C(CO)C(=O)NCc1cccc([C@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
C33H30F3N5O4
617.628000
HSCMCZHMKQTBBD-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775316; PubChem:CID177859457
Local ready
Direct docking supported
E3L041703
BDB041703
BDBM775317
C=C(C)S(=O)(=O)Nc1cccc([C@H]2c3c(C)nn(-c4ccccc4)c3N(CC)C(=O)[C@@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
C32H30F3N5O4S
637.684000
DJAOJLHSBTVMOA-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775317; PubChem:CID176758108
Local ready
Direct docking supported
E3L041704
BDB041704
BDBM775318
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2ccccc2-n2sccc2=O)c2cnn(-c3ccccc3)c21
C31H24F3N5O3S
603.626000
VXVZZRJCRGLVDJ-RRPNLBNLSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775318; PubChem:CID176758064
Local ready
Direct docking supported
E3L041705
BDB041705
BDBM775319
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2ccccc2N(C)C#N)c2cnn(-c3ccccc3)c21
C30H25F3N6O2
558.564000
FTKAETTXPAAZKW-IZZNHLLZSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775319; PubChem:CID176758042
Local ready
Direct docking supported
E3L041706
BDB041706
BDBM775320
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2cccc(N(C)C(=O)C3=CCC3)c2)c2cnn(-c3ccccc3)c21
C34H30F3N5O3
613.640000
VUWMYHOUSGWAHU-URLMMPGGSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775320; PubChem:CID176758275
Local ready
Direct docking supported
E3L041707
BDB041707
BDBM775321
Cc1nn(-c2ccccc2)c2c1[C@H](c1cccc(NC(=O)C3=CCC3)c1)[C@@H](NC(=O)c1cccc(C(F)(F)F)c1)C(=O)N2CCO
C34H30F3N5O4
629.639000
XPGJGQLMGHUKEF-URLMMPGGSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775321
Local ready
Direct docking supported
E3L041708
BDB041708
BDBM775322
C=C(CN1CCOCC1)C(=O)NCc1cccc([C@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
C37H37F3N6O4
686.735000
AXGDNHFHFSKYBE-AJQTZOPKSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775322
Local ready
Direct docking supported
E3L041709
BDB041709
BDBM775323
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2cccc(NC(=O)C3=CCC3)c2)c2c(C)nn(-c3ccccc3)c21
C34H30F3N5O3
613.640000
XYPWINSBKCMDBR-URLMMPGGSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775323; PubChem:CID176327773
Local ready
Direct docking supported
E3L041710
BDB041710
BDBM775324
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2cccc(CNC(=O)/C(C)=C/C(=O)OC)c2)c2cnn(-c3ccccc3)c21
C35H32F3N5O5
659.665000
CWVQHSZEZAEQNV-WYQQIFGWSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775324
Local ready
Direct docking supported
E3L041711
BDB041711
BDBM775325
C=C(CN1CC(F)(F)C1)C(=O)NCc1cccc([C@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
C36H33F5N6O3
692.689000
TWKOOHNMHIGUAN-XZWHSSHBSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775325
Local ready
Direct docking supported
E3L041712
BDB041712
BDBM775326
C=CC(=O)N(C)c1ccccc1[C@H]1c2cnn(-c3ccccc3)c2N(CC)C(=O)[C@@H]1NC(=O)c1cccc(C(F)(F)F)c1
C32H28F3N5O3
587.602000
QDIGEPAWILNNKQ-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775326; PubChem:CID176758319
Local ready
Direct docking supported
E3L041713
BDB041713
BDBM775327
CC#CC(=O)N(C)c1ccccc1[C@H]1c2cnn(-c3ccccc3)c2N(CC)C(=O)[C@@H]1NC(=O)c1cccc(C(F)(F)F)c1
C33H28F3N5O3
599.613000
QUGTZXMYZARIKC-URLMMPGGSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775327; PubChem:CID176758097
Local ready
Direct docking supported
E3L041714
BDB041714
BDBM775328
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2cccc(N(C)C(=O)/C=C/C(F)(F)F)c2)c2cnn(-c3ccccc3)c21
C33H27F6N5O3
655.599000
FVOJANKWPNJQSG-DVLGSLEDSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775328
Local ready
Direct docking supported
E3L041715
BDB041715
BDBM775329
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2cccc(CNC(=O)C(F)Cl)c2)c2cnn(-c3ccccc3)c21
C31H26ClF4N5O3
628.026000
QXMIENCYMPNGQZ-DUGVZXTISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775329; PubChem:CID176757968
Local ready
Direct docking supported
E3L041716
BDB041716
BDBM775330
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2ccccc2CNC(=O)C2=CCC2)c2cnn(-c3ccccc3)c21
C34H30F3N5O3
613.640000
ZRUSMZUEODRPIQ-WDYNHAJCSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775330; PubChem:CID176758085
Local ready
Direct docking supported
E3L041717
BDB041717
BDBM775331
C=C(CN1CCC(F)(F)C1)C(=O)NCc1cccc([C@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
C37H35F5N6O3
706.716000
VLOFKRSRPHFLLS-IOWSJCHKSA-N Q96GG9 DCN1-like protein 1
BindingDB
BindingDB:BDBM775331
Local ready
Direct docking supported
E3L041718
BDB041718
BDBM775332
CCN1C(=O)[C@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2cccc(NC(=O)CC#N)c2)c2c(C)nn(-c3ccccc3)c21
C32H27F3N6O3
600.601000
RBUSUOHDAKHGFL-WUFINQPMSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775332; PubChem:CID176758320
Local ready
Direct docking supported
E3L041719
BDB041719
BDBM775333
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2cccc(CN(C)C#N)c2)c2cnn(-c3ccccc3)c21
C31H27F3N6O2
572.591000
KJXUFSKKARGMMI-SXOMAYOGSA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775333; PubChem:CID176757988
Local ready
Direct docking supported
E3L041720
BDB041720
BDBM775334
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@H](c2ccccc2CNC(=O)C(F)Cl)c2cnn(-c3ccccc3)c21
C31H26ClF4N5O3
628.026000
GUYSDJNDYBJAPZ-DUGVZXTISA-N Q96GG9 DCN1-like protein 1
BindingDB, PubChem
BindingDB:BDBM775334; PubChem:CID176758031
Local ready
Direct docking supported