E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L042181
BDB042181
BDBM781795
O=C1CCC(N2Cc3cc(CN4CCN(C(c5ccc(F)cc5)c5ccc(F)cc5)CC4)c(F)cc3C2=O)C(=O)N1
C31H29F3N4O3
562.592000
ZLPFFBPWTSAWPK-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781795; PubChem:CID171829330
Local ready
Direct docking supported
E3L042182
BDB042182
BDBM781796
O=C1CCC(N2Cc3cc(CN4CCN(C(c5cccc(F)c5)c5cccc(F)c5)CC4)ccc3C2=O)C(=O)N1
C31H30F2N4O3
544.602000
HNJDEPIFECLNBG-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781796; PubChem:CID171829325
Local ready
Direct docking supported
E3L042183
BDB042183
BDBM781797
O=C1CCC(N2Cc3c(ccc(CN4CCN(C(c5cccc(F)c5)c5cccc(F)c5)CC4)c3F)C2=O)C(=O)N1
C31H29F3N4O3
562.592000
YBDVRFDHXOEGGT-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781797; PubChem:CID171829157
Local ready
Direct docking supported
E3L042184
BDB042184
BDBM781798
O=C1CCC(N2Cc3cc(CN4CCN(C(c5cccc(F)c5)c5cccc(F)c5)CC4)c(F)cc3C2=O)C(=O)N1
C31H29F3N4O3
562.592000
UTRXAGBQKOTZGL-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781798; PubChem:CID171829154
Local ready
Direct docking supported
E3L042185
BDB042185
BDBM781799
O=C1CCC(N2Cc3cc(CN4CCN(C(c5cccc(F)c5)c5cccc(F)c5)CC4)cc(F)c3C2=O)C(=O)N1
C31H29F3N4O3
562.592000
UETOTMHUWIZRLR-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781799; PubChem:CID171828892
Local ready
Direct docking supported
E3L042186
BDB042186
BDBM781800
O=C1CCC(N2Cc3cc(CN4CCN(C(c5cc(F)cc(F)c5)c5cc(F)cc(F)c5)CC4)ccc3C2=O)C(=O)N1
C31H28F4N4O3
580.582000
ZTOYEPPJSOXGTA-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781800; PubChem:CID171829060
Local ready
Direct docking supported
E3L042187
BDB042187
BDBM781801
O=C1CCC(N2Cc3cc(NC4CCC(N(c5ccccc5)c5ccccc5)CC4)ccc3C2=O)C(=O)N1
C31H32N4O3
508.622000
YWKMEJZOZXCHPB-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781801; PubChem:CID171829071
Local ready
Direct docking supported
E3L042188
BDB042188
BDBM781802
O=C1CCC(N2Cc3cc(C(=O)N4CCN(C(c5ccccc5)c5ccccc5)CC4C(F)(F)F)ccc3C2=O)C(=O)N1
C32H29F3N4O4
590.602000
ULRJVHPBWTZCMP-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781802; PubChem:CID171829287
Local ready
Direct docking supported
E3L042189
BDB042189
BDBM781803
O=C1CCC(N2Cc3cc(C(=O)N4CCN(C(c5cc(F)cc(F)c5)c5cc(F)cc(F)c5)CC4)ccc3C2=O)C(=O)N1
C31H26F4N4O4
594.565000
SFBGWNFAAGQIHX-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM781803; PubChem:CID171829183
Local ready
Direct docking supported
E3L042190
BDB042190
BDBM783193
Cc1ccc(Cc2cc3c([nH]c2=O)CCN3C(=O)CN2CCNC[C@@H]2CN2CCN(C(=O)CCCCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CCc5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)cc1
C60H81FN12O6
1085.384000
JAGKLXJMJDZQDF-VBFIDOBASA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783193
Local ready
Direct docking supported
E3L042191
BDB042191
BDBM783194
C[C@@H]1CN(CC(=O)N2CC(C)(C)C3=C2C=C(Cc2ccc(F)cc2)C(=O)C3)[C@@H](CN2CCN(C(=O)CCCCCCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)CN1
C67H93F2N11O6
1186.548000
HMAMGZMVBIHQPE-FGGJFVNGSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783194
Local ready
Direct docking supported
E3L042192
BDB042192
BDBM783195
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCN(C(=O)CCCCCCCCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)CN1
C68H96F2N12O6
1215.590000
JHWYXJCJTQCYHA-LYKJKMNLSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783195
Local ready
Direct docking supported
E3L042193
BDB042193
BDBM783196
CC1CN(C(=O)CCCCCCCCCCCCC(=O)N2C[C@@H](C)N(C[C@H]3CN[C@H](C)CN3CC(=O)N3CCC4NC(=O)C(Cc5ccc(F)cc5)CC43)C[C@@H]2C)CCN1C[C@H]1CN[C@H](C)CN1CC(=O)N1CC(C)(C)c2[nH]c(=O)c(Cc3ccc(F)cc3)cc21
C71H106F2N12O6
1261.703000
OHLAPXCVBUSFDL-KRRCDHDOSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783196
Local ready
Direct docking supported
E3L042194
BDB042194
BDBM783197
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCN(C(=O)COCCOCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)CN1
C64H88F2N12O8
1191.480000
ZQTRRNPWPXEMMB-CLBHTXFQSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783197
Local ready
Direct docking supported
E3L042195
BDB042195
BDBM783198
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)C(CN2CCN(C(=O)COCCOCCOCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)CN1
C66H92F2N12O9
1235.533000
MGYNFVGNOKNMAM-VLVPEDBZSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783198
Local ready
Direct docking supported
E3L042196
BDB042196
BDBM783199
C[C@H]1CC[C@H](CN2CCN(C(=O)Cc3ccccc3CC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)N(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)C1
C69H89F2N11O6
1206.538000
YKHDOPIEYGYWEO-PFCDLUHZSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783199
Local ready
Direct docking supported
E3L042197
BDB042197
BDBM783200
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)C(CN2CCN(C(=O)COCCOCC(=O)N3CCN(C[C@H]4CN[C@H](C)CN4CC(=O)C4CCc5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)[C@H](C)C3)C[C@H]2C)CN1
C63H85F2N11O8
1162.438000
OAFGERCEZZMVOI-HPVSIASASA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783200
Local ready
Direct docking supported
E3L042198
BDB042198
BDBM783201
C[C@@H]1CN(CC(=O)N2CCc3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCN(C(=O)c3cccc(C(=O)N4CCN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)[C@H](C)C4)c3)C[C@H]2C)CN1
C64H80F2N12O6
1151.418000
RQQVCZABUAZXLN-WTOXWFQDSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783201
Local ready
Direct docking supported
E3L042199
BDB042199
BDBM783202
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)C(CN2CCN(C(=O)Cc3cccc(CC(=O)N4CCN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CC4)c3)C[C@H]2C)CN1
C67H86F2N12O6
1193.499000
PKCLCODLAPUADF-PNSNWRTPSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783202
Local ready
Direct docking supported
E3L042200
BDB042200
BDBM783203
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCN(C(=O)COc3cccc(OCC(=O)N4CCN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)[C@H](C)C4)c3)C[C@H]2C)CN1
C68H88F2N12O8
1239.524000
ICLFHBPONMKCGR-ZHSKVTLCSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783203
Local ready
Direct docking supported