E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
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Structure similarity search Input SMILES or upload SDF/MOL/MOL2/PDB/PDBQT; results use Morgan fingerprint Tanimoto.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L042301
BDB042301
 BDBM783304
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@@H](COc3cccc(OC[C@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)c3)C2)CN1
 C64H82F2N10O8
1157.418000		 MYOKHRUTGIGVCF-RKXXMCJASA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783304
 Local ready
Direct docking supported
E3L042302
BDB042302
 BDBM783305
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@@H](COCCCCOC[C@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C62H86F2N10O8
1137.428000		 HNNQKZCYDVGGMV-MNMSCMMSSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783305
 Local ready
Direct docking supported
E3L042303
BDB042303
 BDBM783306
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3c2cc(Cc2ccc(F)cc2)c(=O)n3C)[C@@H](CN2CCO[C@H](COc3cccc(OC[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6c5cc(Cc5ccc(F)cc5)c(=O)n6C)CCO4)c3)C2)CN1
 C66H86F2N10O8
1185.472000		 RNSORXGIOFJAQP-QXOCEMHNSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783306
 Local ready
Direct docking supported
E3L042304
BDB042304
 BDBM783307
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3c2cc(Cc2ccc(F)cc2)c(=O)n3C)[C@@H](CN2CCO[C@H](COc3ccc(Cc4ccc(OC[C@@H]5CN(C[C@H]6CN[C@H](C)CN6CC(=O)N6CC(C)(C)c7c6cc(Cc6ccc(F)cc6)c(=O)n7C)CCO5)cc4)cc3)C2)CN1
 C73H92F2N10O8
1275.597000		 RNQGJHLFXJEHDB-GDCSITPZSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783307
 Local ready
Direct docking supported
E3L042305
BDB042305
 BDBM783308
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3c2cc(Cc2ccc(F)cc2)c(=O)n3C)[C@@H](CN2CCO[C@H](COCC#CC#CCOC[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5c4cc(Cc4ccc(F)cc4)c(=O)n5C)CCO3)C2)CN1
 C66H86F2N10O8
1185.472000		 AHUGCLDEIOGAAT-JGTIFPSXSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783308
 Local ready
Direct docking supported
E3L042306
BDB042306
 BDBM783309
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3c2cc(Cc2ccc(F)cc2)c(=O)n3C)[C@@H](CN2CCO[C@H](COCc3ccc(COC[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6c5cc(Cc5ccc(F)cc5)c(=O)n6C)CCO4)cc3)C2)CN1
 C68H90F2N10O8
1213.526000		 GCLXTMQLKUHAJX-MEBDUZIESA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783309
 Local ready
Direct docking supported
E3L042307
BDB042307
 BDBM783310
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)N3CCN(C(=O)[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)CC3)C2)CN1
 C62H82F2N12O8
1161.410000		 OLGJFBOHTVNVPD-PAEITVHVSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783310
 Local ready
Direct docking supported
E3L042308
BDB042308
 BDBM783311
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCCCCCCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C66H92F2N12O8
1219.534000		 ARFUDWLSXYLBOK-QXOCEMHNSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783311
 Local ready
Direct docking supported
E3L042309
BDB042309
 BDBM783312
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCCCCCCCCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C68H96F2N12O8
1247.588000		 AVYFDPBYGWKKBG-OOZNVROASA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783312
 Local ready
Direct docking supported
E3L042310
BDB042310
 BDBM783313
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCOCCOCCOCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C66H92F2N12O11
1267.531000		 QEZFQIOHOJJHSC-QXOCEMHNSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783313
 Local ready
Direct docking supported
E3L042311
BDB042311
 BDBM783314
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCc3cccc(CNC(=O)[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)c3)C2)CN1
 C66H84F2N12O8
1211.470000		 SZFVPADHXNZNET-HJIFXQICSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783314
 Local ready
Direct docking supported
E3L042312
BDB042312
 BDBM783315
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCCN3CCN(CCCNC(=O)[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)CC3)C2)CN1
 C68H96F2N14O8
1275.602000		 HIXDQGDGQOLXPP-XDWHOTOFSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783315
 Local ready
Direct docking supported
E3L042313
BDB042313
 BDBM783316
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)N(C)CCCCCCN(C)C(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C66H92F2N12O8
1219.534000		 WPIVZRMUOWEPNG-QXOCEMHNSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783316
 Local ready
Direct docking supported
E3L042314
BDB042314
 BDBM783317
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C61H82F2N12O8
1149.399000		 BRQBWMHJPZSZEQ-RZJZETLLSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783317
 Local ready
Direct docking supported
E3L042315
BDB042315
 BDBM783318
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C62H84F2N12O8
1163.426000		 QAKRFBAGPGVJHN-PAEITVHVSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783318
 Local ready
Direct docking supported
E3L042316
BDB042316
 BDBM783319
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)N(C)CCCCN(C)C(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C64H88F2N12O8
1191.480000		 ZEOVLSFUXHTKQV-AEZFHRCYSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783319
 Local ready
Direct docking supported
E3L042317
BDB042317
 BDBM783320
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NCCNC(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C60H80F2N12O8
1135.372000		 KYVUBNBOPKQVET-XSJLYLQKSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783320
 Local ready
Direct docking supported
E3L042318
BDB042318
 BDBM783321
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)NC3CCN(C(=O)[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)CC3)C2)CN1
 C63H84F2N12O8
1175.437000		 SCZZKKOCCPHAKK-MQZDLNSMSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783321
 Local ready
Direct docking supported
E3L042319
BDB042319
 BDBM783322
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)N(C)CCCN(C)C(=O)[C@@H]3CN(C[C@H]4CN[C@H](C)CN4CC(=O)N4CC(C)(C)c5[nH]c(=O)c(Cc6ccc(F)cc6)cc54)CCO3)C2)CN1
 C63H86F2N12O8
1177.453000		 MJPGKOITYMCNFH-URZJVMFDSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783322
 Local ready
Direct docking supported
E3L042320
BDB042320
 BDBM783323
C[C@@H]1CN(CC(=O)N2CC(C)(C)c3[nH]c(=O)c(Cc4ccc(F)cc4)cc32)[C@@H](CN2CCO[C@H](C(=O)N3CCCN(C(=O)[C@@H]4CN(C[C@H]5CN[C@H](C)CN5CC(=O)N5CC(C)(C)c6[nH]c(=O)c(Cc7ccc(F)cc7)cc65)CCO4)CC3)C2)CN1
 C63H84F2N12O8
1175.437000		 YFSDVWCJUCJFBX-URZJVMFDSA-N Q13490 Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM783323
 Local ready
Direct docking supported