E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L044941
BDB044941
BDBM50050554
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CC(C)(C)CC(C)(C)C2)cc1
C36H46N2O4
570.774000
CTTGJGHAKDHCCV-GDLZYMKVSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050554; PubChem:CID118708440
Local ready
Direct docking supported
E3L044942
BDB044942
BDBM50050555
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCCCCCCC2)cc1
C35H44N2O4
556.747000
LEXLSPDBTSINAM-SSEXGKCCSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050555; PubChem:CID118708437
Local ready
Direct docking supported
E3L044943
BDB044943
BDBM50050556
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCCCCCC2)cc1
C34H42N2O4
542.720000
NLXAFEDDAOLUIF-GDLZYMKVSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050556; PubChem:CID102313443
Local ready
Direct docking supported
E3L044944
BDB044944
BDBM50050557
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCCCC2)cc1
C32H38N2O4
514.666000
ISYAJDFASPMBOB-HHHXNRCGSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050557; PubChem:CID56929502
Local ready
Direct docking supported
E3L044945
BDB044945
BDBM50050558
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCC(C)(C)CC2)cc1
C34H42N2O4
542.720000
UBUMMWDGHYPBOH-MUUNZHRXSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050558; PubChem:CID118708439
Local ready
Direct docking supported
E3L044946
BDB044946
BDBM50050559
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCCC(C)(C)C2)cc1
C34H42N2O4
542.720000
APPIJDBGUOOXLM-MUUNZHRXSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050559; PubChem:CID118708438
Local ready
Direct docking supported
E3L044947
BDB044947
BDBM50050560
CCCOc1ccc(C[C@@H](Cc2ccccc2)C(=O)O)cc1CNC(=O)c1ccc(N2CCCCCC2)cc1
C33H40N2O4
528.693000
MYAQZDUYOUGKCB-MUUNZHRXSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050560; PubChem:CID102313441
Local ready
Direct docking supported
E3L044948
BDB044948
BDBM50050894
O=C(O)CSc1nc(Cl)cc(Nc2ccc(Nc3ccccc3)cc2)n1
C18H15ClN4O2S
386.864000
YENRXHUCHIMRDZ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50050894; PubChem:CID118708577
Local ready
Direct docking supported
E3L044949
BDB044949
BDBM50050895
CCCCC(Sc1nc(Cl)cc(Nc2ccc(Nc3ccccc3)cc2)n1)C(=O)O
C22H23ClN4O2S
442.972000
ILFCCNWAYAKTGG-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50050895; PubChem:CID118708578
Local ready
Direct docking supported
E3L044950
BDB044950
BDBM50050896
CCCCCCC(Sc1nc(Cl)cc(Nc2ccc(Nc3ccccc3)cc2)n1)C(=O)O
C24H27ClN4O2S
471.026000
UPRVFMBNCGRTAR-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050896; PubChem:CID118708579
Local ready
Direct docking supported
E3L044951
BDB044951
BDBM50050897
CCCCCCC(Sc1nc(Cl)cc(Nc2ccc(C(=O)c3ccc(N)cc3)cc2)n1)C(=O)O
C25H27ClN4O3S
499.036000
ILCZJJNFQICUSE-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050897; PubChem:CID118708580
Local ready
Direct docking supported
E3L044952
BDB044952
BDBM50050898
CCCCCCC(Sc1nc(Cl)cc(Nc2ccc(Oc3ccccc3)cc2)n1)C(=O)O
C24H26ClN3O3S
472.010000
LJNZOEDPQZEKCO-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050898; PubChem:CID118708581
Local ready
Direct docking supported
E3L044953
BDB044953
BDBM50050899
CCCCCCC(Sc1nc(Cl)cc(Nc2ccc(Cc3ccccc3)cc2)n1)C(=O)O
C25H28ClN3O2S
470.038000
GCOWGQRVXBEWBO-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50050899; PubChem:CID118708582
Local ready
Direct docking supported
E3L044954
BDB044954
Unc0379
COc1cc2nc(N3CCCC3)nc(NCCCCCN3CCCC3)c2cc1OC
C23H35N5O2
413.566000
WEXCGGWTIDNVNT-UHFFFAOYSA-N Q03164 Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM50051117; PubChem:CID78357767
Local ready
Direct docking supported
E3L044955
BDB044955
BDBM50051941
COc1ccc(NC(=O)CC(=O)Nc2ccc3c(c2)NC(=O)/C3=C\c2[nH]c(C)c(C(=O)O)c2C)cc1
C26H24N4O6
488.500000
LFKPJUFFMOTFRX-ODLFYWEKSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50051941; PubChem:CID118710236
Local ready
Direct docking supported
E3L044956
BDB044956
BDBM50051942
O=C(CC(=O)Nc1ccc2c(c1)NC(=O)/C2=C\c1ccc[nH]1)Nc1ccc(F)cc1
C22H17FN4O3
404.401000
LILXUVCZUBSSFA-ZDLGFXPLSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50051942; PubChem:CID71815105
Local ready
Direct docking supported
E3L044957
BDB044957
BDBM50052428
O=C1CCC(N2C(=O)c3c(F)c(F)c(F)c(F)c3C2=O)C(=O)N1
C13H6F4N2O4
330.193000
PIJMHCCGPUSELZ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50052428; PubChem:CID467265
Local ready
Direct docking supported
E3L044958
BDB044958
BDBM50053040
CC(C)NS(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C28H34Cl2N2O5S
581.562000
OLQSAQIIKIWIRZ-YWCVFVGNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50053040; PubChem:CID68000097
Local ready
Direct docking supported
E3L044959
BDB044959
BDBM50053041
C[C@]1(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N([C@H](CS(=O)(=O)NCC2CCC2)C2CC2)C1=O
C30H36Cl2N2O5S
607.600000
NOJSWEHJYONNRA-QXMDYEBFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50053041; PubChem:CID118709121
Local ready
Direct docking supported
E3L044960
BDB044960
BDBM50053042
C[C@]1(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N([C@H](CS(=O)(=O)NCC2CC2)C2CC2)C1=O
C29H34Cl2N2O5S
593.573000
HYAVQGODBWRNSC-GCMXZSHTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50053042; PubChem:CID118709120
Local ready
Direct docking supported