E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L045301
BDB045301
BDBM50069627
CC(C)C1=C(C(=O)N2[C@H](C)CC[C@H]2C(=O)N2CCNC3(CC3)C2)SC2=N[C@@](C)(c3ccc(Cl)cc3)[C@@H](c3ccc(Cl)cc3)N21
C34H39Cl2N5O2S
652.692000
XLBQSMBISPUIMT-MAMXRPNDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069627
Local ready
Direct docking supported
E3L045302
BDB045302
BDBM50069628
CC(C)C1=C(C(=O)N2[C@H](C)CC[C@H]2C(=O)N2CCNC3(CC3)C2)SC2=N[C@@](C)(c3ccc(Cl)cc3)[C@@H](c3ccc(Cl)c(F)c3)N21
C34H38Cl2FN5O2S
670.682000
LIFXVTDIRXSOPW-ZNGXGWPMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069628
Local ready
Direct docking supported
E3L045303
BDB045303
BDBM50069629
CC(C)C1=C(C(=O)N2[C@H](C)CC[C@H]2C(=O)N2CCNC3(CC3)C2)SC2=N[C@@](C)(c3ccc(Cl)nc3)[C@@H](c3ccc(Cl)c(F)c3)N21
C33H37Cl2FN6O2S
671.670000
FZPRQVYQBJKIQG-KERGWKIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069629
Local ready
Direct docking supported
E3L045304
BDB045304
BDBM50069630
CC(C)C1=C(C(=O)N2[C@H](C)CC[C@H]2C(=O)N2CC3(CC3)NC[C@@H]2C)SC2=N[C@@](C)(c3ccc(Cl)nc3)[C@@H](c3ccc(Cl)c(F)c3)N21
C34H39Cl2FN6O2S
685.697000
KUZMUIBQNCSWPP-BYJYTBDMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069630
Local ready
Direct docking supported
E3L045305
BDB045305
BDBM50069631
CC(C)C1=C(C(=O)N2C[C@H](F)C[C@H]2C(=O)N2CC3(CC3)NC[C@@H]2C)SC2=N[C@@](C)(c3ccc(Cl)nc3)[C@@H](c3ccc(Cl)c(F)c3)N21
C33H36Cl2F2N6O2S
689.660000
OKIDBNYMCUVSLU-QSSUNTQZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069631
Local ready
Direct docking supported
E3L045306
BDB045306
BDBM50069632
CC[C@@H]1CNC2(CC2)CN1C(=O)[C@@H]1C[C@@H](F)CN1C(=O)C1=C(C(C)C)N2C(=N[C@@](C)(c3ccc(Cl)nc3)[C@H]2c2ccc(Cl)c(F)c2)S1
C34H38Cl2F2N6O2S
703.687000
QUYOIFDRHGZSFZ-YABFKZQLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069632
Local ready
Direct docking supported
E3L045307
BDB045307
ML323
Cc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-n2ccnn2)cc1
C23H24N6
384.487000
VUIRVWPJNKZOSS-UHFFFAOYSA-N Q8TAF3 WD repeat-containing protein 48, Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM50069762; PubChem:CID60167849
Local ready
Direct docking supported
E3L045308
BDB045308
2-Phenylnaphtho[2,3-D]oxazole-4,9-dione
O=C1c2ccccc2C(=O)c2oc(-c3ccccc3)nc21
C17H9NO3
275.263000
CMYQQADDUUDCCA-UHFFFAOYSA-N Q8TAF3 WD repeat-containing protein 48
BindingDB, PubChem
BindingDB:BDBM50069763; PubChem:CID509070
Local ready
Direct docking supported
E3L045309
BDB045309
BDBM50069769
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2F)[C@H]1c1ccc(Cl)cc1
C29H34Cl2FNO5S
598.564000
HUXQNTCNYMUORT-KVFVXYHUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50069769; PubChem:CID118730174
Local ready
Direct docking supported
E3L045310
BDB045310
BDBM50069779
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N2CC(C(=O)O)C2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C33H40Cl2N2O6S
663.664000
SETAPPWUUITUNL-UNVYQVKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069779
Local ready
Direct docking supported
E3L045311
BDB045311
BDBM50069780
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N[C@H]2C[C@@H](C(=O)O)C2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C34H42Cl2N2O6S
677.691000
LASZTPUNWIOFCD-OJLCMILUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069780
Local ready
Direct docking supported
E3L045312
BDB045312
BDBM50069781
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N[C@H]2C[C@H](C(=O)O)C2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C34H42Cl2N2O6S
677.691000
LASZTPUNWIOFCD-MQXPBDQNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069781
Local ready
Direct docking supported
E3L045313
BDB045313
BDBM50069782
CC1(C(=O)O)CCN(C(=O)C[C@@]2(C)C[C@H](c3cccc(Cl)c3)[C@@H](c3ccc(Cl)cc3)N([C@H](CS(=O)(=O)C(C)(C)C)C3CC3)C2=O)CC1
C36H46Cl2N2O6S
705.745000
CJCKYZRDBDLOND-NLNUXBGRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069782
Local ready
Direct docking supported
E3L045314
BDB045314
BDBM50069783
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N2CCC(C(=O)O)CC2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C35H44Cl2N2O6S
691.718000
HWQABLRWBNVPEA-FHSDPBSVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069783
Local ready
Direct docking supported
E3L045315
BDB045315
BDBM50069784
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)NC23CCC(C(=O)O)(CC2)CC3)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C38H48Cl2N2O6S
731.783000
LKAFLOJDLRJSEW-BTIIEKRBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069784
Local ready
Direct docking supported
E3L045316
BDB045316
BDBM50069785
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N[C@H]2CC[C@@H](C(=O)O)CC2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C36H46Cl2N2O6S
705.745000
FJPANYABHZXLHT-YKIGISQSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069785
Local ready
Direct docking supported
E3L045317
BDB045317
BDBM50069786
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)N[C@H]2CC[C@H](C(=O)O)CC2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C36H46Cl2N2O6S
705.745000
FJPANYABHZXLHT-DYBNVOJMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069786
Local ready
Direct docking supported
E3L045318
BDB045318
BDBM50069787
CN(C(=O)C[C@@]1(C)C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N([C@H](CS(=O)(=O)C(C)(C)C)C2CC2)C1=O)c1ccc(C(=O)O)cc1
C37H42Cl2N2O6S
713.724000
QVCKQBFDNHFPSU-VYUOYPLNSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069787
Local ready
Direct docking supported
E3L045319
BDB045319
BDBM50069788
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)Nc2ccc(CC(=O)O)cc2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C37H42Cl2N2O6S
713.724000
NUDVETAHJOGXOQ-VIUCBDPOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069788
Local ready
Direct docking supported
E3L045320
BDB045320
BDBM50069789
CC(C)(C)S(=O)(=O)C[C@H](C1CC1)N1C(=O)[C@@](C)(CC(=O)Nc2ccc(C(=O)O)cn2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C35H39Cl2N3O6S
700.685000
UQSDNKFAAYCQSH-KHRUNOBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50069789
Local ready
Direct docking supported