E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L045541
BDB045541
BDBM50085583
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccccc1
C20H20N2O4S
384.457000
JCCCYXBQDALCFY-HYARGMPZSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085583; PubChem:CID91931266
Local ready
Direct docking supported
E3L045542
BDB045542
BDBM50085584
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccc(-c2ccccc2)nc1
C25H23N3O4S
461.543000
XEBFGNFKQXTJPF-OGLMXYFKSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085584; PubChem:CID91931267
Local ready
Direct docking supported
E3L045543
BDB045543
BDBM50085585
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccncc1
C19H19N3O4S
385.445000
BURJNFSXLACPDU-LPYMAVHISA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085585; PubChem:CID91931268
Local ready
Direct docking supported
E3L045544
BDB045544
BDBM50085586
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccc(-c2ccccc2)cn1
C25H23N3O4S
461.543000
WMRKIBZIDFWHLF-OGLMXYFKSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085586; PubChem:CID91931269
Local ready
Direct docking supported
E3L045545
BDB045545
BDBM50085587
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccc(-c2ccccc2)cc1
C26H24N2O4S
460.555000
NEAYCBZMRZEYSZ-MTDXEUNCSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085587; PubChem:CID91931270
Local ready
Direct docking supported
E3L045546
BDB045546
BDBM50085588
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1cccnc1
C19H19N3O4S
385.445000
KWXVIFZQEZECGR-LPYMAVHISA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085588; PubChem:CID91931271
Local ready
Direct docking supported
E3L045547
BDB045547
BDBM50085589
O=c1[nH]c(O)c(Cc2ccc(OCCO/N=C/c3ccc(-c4ccccc4)cc3)cc2)s1
C25H22N2O4S
446.528000
LIMZNSBJVOABTB-YZSQISJMSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085589; PubChem:CID91931272
Local ready
Direct docking supported
E3L045548
BDB045548
BDBM50085590
C/C(=N\OCCOc1ccc(Cc2sc(=O)[nH]c2O)cc1)c1ccccn1
C19H19N3O4S
385.445000
MWWWEDFZGCXGFP-LPYMAVHISA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50085590; PubChem:CID91931273
Local ready
Direct docking supported
E3L045549
BDB045549
BDBM50086441
CCn1nc(C#Cc2cc(C(=O)Nc3ccc(CN4CCN(C)CC4)c(C(F)(F)F)c3)ccc2C)c2c(N)ncnc21
C30H31F3N8O
576.627000
BNRXMSGHPVYSDK-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50086441; PubChem:CID118737057
Local ready
Direct docking supported
E3L045550
BDB045550
Ryuvidine
Cc1ccc(NC2=CC(=O)c3sc(C)nc3C2=O)cc1
C15H12N2O2S
284.340000
HFPLHASLIOXVGS-UHFFFAOYSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM50086655; PubChem:CID481747
Local ready
Direct docking supported
E3L045551
BDB045551
Cytarabine
Nc1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O)c(=O)n1
C9H13N3O5
243.219000
UHDGCWIWMRVCDJ-CCXZUQQUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50087289; PubChem:CID6253
Local ready
Direct docking supported
E3L045552
BDB045552
BDBM50087427
COc1ccc(/C=C/c2ccc3ccc(C(=O)O)c(O)c3n2)cc1O
C19H15NO5
337.331000
FSLDLBJGAMZARH-QHHAFSJGSA-N Q92630 Dual specificity tyrosine-phosphorylation-regulated kinase 2
BindingDB, PubChem
BindingDB:BDBM50087427; PubChem:CID6475560
Local ready
Direct docking supported
E3L045553
BDB045553
Deferasirox
O=C(O)c1ccc(-n2nc(-c3ccccc3O)nc2-c2ccccc2O)cc1
C21H15N3O4
373.368000
BOFQWVMAQOTZIW-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50088376; PubChem:CID214348
Local ready
Direct docking supported
E3L045554
BDB045554
Everolimus
CO[C@H]1C[C@@H]2CC[C@@H](C)[C@@](O)(O2)C(=O)C(=O)N2CCCC[C@H]2C(=O)O[C@H]([C@H](C)C[C@@H]2CC[C@@H](OCCO)[C@H](OC)C2)CC(=O)[C@H](C)/C=C(\C)[C@@H](O)[C@@H](OC)C(=O)[C@H](C)C[C@H](C)/C=C/C=C/C=C/1C
C53H83NO14
958.240000
HKVAMNSJSFKALM-GKUWKFKPSA-N Q9BVC4 Target of rapamycin complex subunit LST8
BindingDB, PubChem
BindingDB:BDBM50088378; PubChem:CID6442177
Local ready
Direct docking supported
E3L045555
BDB045555
BDBM50088494
Cc1c(C)c2c(c(C)c1O)CC[C@](C)(COc1ccc(C[C@H]3SC(=O)NC3=O)cc1)O2
C24H27NO5S
441.549000
GXPHKUHSUJUWKP-NTKDMRAZSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50088494; PubChem:CID9824580
Local ready
Direct docking supported
E3L045556
BDB045556
Uridine
O=c1ccn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)[nH]1
C9H12N2O6
244.203000
DRTQHJPVMGBUCF-XVFCMESISA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50088517; PubChem:CID6029
Local ready
Direct docking supported
E3L045557
BDB045557
BDBM50089221
CCNC(=O)NCCSC[C@H]1O[C@@H](n2cnc3c(N)ncnc32)[C@H](O)[C@@H]1O
C15H23N7O4S
397.461000
CACMCLIHCDTJHL-IDTAVKCVSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM50089221; PubChem:CID122178085
Local ready
Direct docking supported
E3L045558
BDB045558
BDBM50089862
COc1ccc2c(c1)C(CC(=O)N[C@@H](CNC(=O)c1ccccc1N1CCC(=O)NC1=O)C(N)=O)CC2=O
C26H27N5O7
521.530000
YFRJWFALOKTWJY-PKDNWHCCSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50089862; PubChem:CID122177963
Local ready
Direct docking supported
E3L045559
BDB045559
BDBM50089863
COc1ccc2c(c1)C(CC(=O)NCCNC(=O)c1ccccc1N1CCC(=O)NC1=O)CC2=O
C25H26N4O6
478.505000
KRLQJSZEXYIYPQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50089863; PubChem:CID122177964
Local ready
Direct docking supported
E3L045560
BDB045560
BDBM50089864
COc1ccc2c(c1)C(CC(=O)N1CCN(C(=O)c3ccccc3N3CCC(=O)NC3=O)CC1)CC2=O
C27H28N4O6
504.543000
VRIIEPKACOZIMS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50089864; PubChem:CID122177965
Local ready
Direct docking supported