E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L045881
BDB045881
BDBM50106325
O=C(c1c(Cl)cccc1C(F)(F)F)c1nc(C2=CCC(C(=O)O)CC2)c2ccccn12
C22H16ClF3N2O3
448.828000
PVQJAHJILZAYMT-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106325; PubChem:CID117964960
Local ready
Direct docking supported
E3L045882
BDB045882
BDBM50106326
O=C(c1c(Cl)cccc1C(F)(F)F)c1nc(N2CCC(C(=O)O)CC2)c2ccccn12
C21H17ClF3N3O3
451.832000
GMKDGMOOAQPPOB-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106326; PubChem:CID117953851
Local ready
Direct docking supported
E3L045883
BDB045883
BDBM50106494
Oc1c(N=CCN2CCOCC2)c(Cl)c(O)c2ncccc12
C15H16ClN3O3
321.764000
QPIYLJBIUAHGPU-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50106494; PubChem:CID136110902
Local ready
Direct docking supported
E3L045884
BDB045884
BDBM50106497
Oc1c(Cl)c(N=CCN2CCOCC2)c(O)c2ncccc12
C15H16ClN3O3
321.764000
DWRQCWWWWDTWHB-UHFFFAOYSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase, H3 lysine-36 specific, Histone-lysine N-methyltransferase NSD3
BindingDB, PubChem
BindingDB:BDBM50106497; PubChem:CID136110904
Local ready
Direct docking supported
E3L045885
BDB045885
BDBM50106499
Oc1c(Cl)c(N=CCc2c[nH]c3ccccc23)c(O)c2ncccc12
C19H14ClN3O2
351.793000
YDQFQLGMQJNASR-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50106499; PubChem:CID136110906
Local ready
Direct docking supported
E3L045886
BDB045886
6-Chloro-7-(indan-1-ylamino)-quinoline-5,8-dione
O=C1C(Cl)=C(NC2CCc3ccccc32)C(=O)c2ncccc21
C18H13ClN2O2
324.767000
QNVSFGNOGHOYKE-UHFFFAOYSA-N O96028 Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50106505; PubChem:CID5461522
Local ready
Direct docking supported
E3L045887
BDB045887
BDBM50106623
CN(C)c1ccc2c(-c3ccc(C(=O)NCCCC[C@H](NC(=O)[C@H](Cc4ccccc4)NC(=O)[C@H](Cc4ccccc4)NC(=O)CCCNC(=O)[C@]4(Cc5cccc(Nc6nccs6)n5)CC[C@@H](Oc5cccc(Cl)c5F)CC4)C(N)=O)cc3C(=O)O)c3ccc(=[N+](C)C)cc-3oc2c1
C75H80ClFN11O10S+
1382.050000
UWFXBLOCRMTTTR-GTHGGJTNSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106623
Local ready
Direct docking supported
E3L045888
BDB045888
BDBM50106624
CN(C)c1ccc2c(c1)OC1=CC(=[N+](C)C)C=CC1C2c1ccc(C(=O)NCCCC[C@@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)CCCCCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)cc1C(=O)O
C104H148ClFN37O15S+
2243.090000
LWVULLNCBHWMOG-VTRXMQFQSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106624
Local ready
Direct docking supported
E3L045889
BDB045889
BDBM50106625
CCN1/C(=C/C=C/C2=[N+](CC)c3ccc(S(=O)(=O)O)cc3C2(C)C)C(C)(CCCC(=O)NCCCC[C@@H](NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)[C@@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)CCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)c2cc(S(=O)(=O)O)ccc21
C115H162ClFN41O19S3+
2573.481000
PUPTXCZKZNDECK-ZDCMHULVSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106625
Local ready
Direct docking supported
E3L045890
BDB045890
BDBM50106626
CCN1/C(=C/C=C/C2=[N+](CC)c3ccc(S(=O)(=O)O)cc3C2(C)C)C(C)(CCCC(=O)NCCCC[C@@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)[C@@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)CCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)c2cc(S(=O)(=O)O)ccc21
C115H162ClFN41O19S3+
2573.481000
PUPTXCZKZNDECK-QTKBVYGSSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106626
Local ready
Direct docking supported
E3L045891
BDB045891
BDBM50106627
CCN1/C(=C/C=C/C2=[N+](CC)c3ccc(S(=O)(=O)O)cc3C2(C)C)C(C)(CCCC(=O)NCCCC[C@@H](NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)[C@H](Cc2ccc(N=[N+]=[N-])cc2)NC(=O)CCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)c2cc(S(=O)(=O)O)ccc21
C115H162ClFN41O19S3+
2573.481000
PUPTXCZKZNDECK-RSSQFEJJSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106627
Local ready
Direct docking supported
E3L045892
BDB045892
BDBM50106628
CCN1/C(=C/C=C/C2=[N+](CC)c3ccc(S(=O)(=O)O)cc3C2(C)C)C(C)(CCCC(=O)NCCCC[C@@H](NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](Cc2ccc(C(=O)c3ccccc3)cc2)NC(=O)[C@@H](Cc2ccc(C(=O)c3ccccc3)cc2)NC(=O)CCCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)c2cc(S(=O)(=O)O)ccc21
C130H174ClFN35O21S3+
2713.698000
NMCLTHGFKTYNRG-RCDFXLKPSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106628
Local ready
Direct docking supported
E3L045893
BDB045893
BDBM50106629
CCN1/C(=C/C=C/C2=[N+](CC)c3ccc(S(=O)(=O)O)cc3C2(C)C)C(C)(CCCC(=O)NCCCC[C@@H](NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@@H](CCCNC(=N)N)NC(=O)[C@H](Cc2ccc(C(=O)c3ccccc3)cc2)NC(=O)[C@H](Cc2ccc(C(=O)c3ccccc3)cc2)NC(=O)CCCNC(=O)[C@]2(Cc3cccc(Nc4nccs4)n3)CC[C@@H](Oc3cccc(Cl)c3F)CC2)C(N)=O)c2cc(S(=O)(=O)O)ccc21
C130H174ClFN35O21S3+
2713.698000
NMCLTHGFKTYNRG-KGSVLNJBSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106629
Local ready
Direct docking supported
E3L045894
BDB045894
BDBM50106630
CN(C)c1ccc2c(-c3ccc(C(=O)NCCCOCCOCCOCCCNC(=O)[C@@H](Cc4ccc(N=[N+]=[N-])cc4)NC(=O)CCNC(=O)[C@]4(Cc5cccc(Nc6nccs6)n5)CC[C@@H](Oc5cccc(Cl)c5F)CC4)cc3C(=O)O)c3ccc(=[N+](C)C)cc-3oc2c1
C69H77ClFN12O11S+
1336.966000
CDWKMYVLKUNTKV-QXUUHLILSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106630
Local ready
Direct docking supported
E3L045895
BDB045895
BDBM50106631
CN(C)c1ccc2c(-c3ccc(C(=O)NCCCC[C@H](NC(=O)[C@H](Cc4ccc(N=[N+]=[N-])cc4)NC(=O)[C@H](Cc4ccc(N=[N+]=[N-])cc4)NC(=O)CCCNC(=O)[C@]4(Cc5cccc(Nc6nccs6)n5)CC[C@@H](Oc5cccc(Cl)c5F)CC4)C(N)=O)cc3C(=O)O)c3ccc(=[N+](C)C)cc-3oc2c1
C75H78ClFN17O10S+
1464.076000
VAODJRFNNYWTNF-GTHGGJTNSA-O O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50106631
Local ready
Direct docking supported
E3L045896
BDB045896
BDBM50106959
Cc1oc(-c2ccccc2)nc1CCOc1ccc(C[C@@H](C(=O)O)N(C)C)cc1
C23H26N2O4
394.471000
ZIACYBMFSHANKX-NRFANRHFSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106959; PubChem:CID44335992
Local ready
Direct docking supported
E3L045897
BDB045897
Unii-W6E59kdd9D
CCCN[C@@H](Cc1ccc(OCCc2nc(-c3ccccc3)oc2C)cc1)C(=O)O
C24H28N2O4
408.498000
RDGUFKZGMLPVHL-QFIPXVFZSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106960; PubChem:CID9822722
Local ready
Direct docking supported
E3L045898
BDB045898
BDBM50106961
CC(=O)N[C@@H](Cc1ccc(OCCc2nc(-c3ccccc3)oc2C)cc1)C(=O)O
C23H24N2O5
408.454000
ZFMJLCXLVNCIPH-NRFANRHFSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106961; PubChem:CID44336013
Local ready
Direct docking supported
E3L045899
BDB045899
BDBM50106962
CN[C@@H](Cc1ccc(OCCc2nc(-c3ccccc3)oc2C)cc1)C(=O)O
C22H24N2O4
380.444000
KHUBFFUIONROOT-FQEVSTJZSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106962; PubChem:CID44336048
Local ready
Direct docking supported
E3L045900
BDB045900
BDBM50106963
Cc1oc(-c2ccccc2)nc1CCOc1ccc(C[C@H](NS(C)(=O)=O)C(=O)O)cc1
C22H24N2O6S
444.509000
DFSWOTWJGYLTOW-FQEVSTJZSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50106963; PubChem:CID44335916
Local ready
Direct docking supported