E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L047121
BDB047121
N-(5-methyl-1H-pyrazol-3-yl)-2-phenylquinazolin-4-amine
Cc1cc(Nc2nc(-c3ccccc3)nc3ccccc23)[nH]n1
C18H15N5
301.353000
JYCUVOXSZBECAY-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50162083; PubChem:CID6419766
Local ready
Direct docking supported
E3L047122
BDB047122
Venetoclax
CC1(C)CCC(CN2CCN(c3ccc(C(=O)NS(=O)(=O)c4ccc(NCC5CCOCC5)c([N+](=O)[O-])c4)c(Oc4cnc5[nH]ccc5c4)c3)CC2)=C(c2ccc(Cl)cc2)C1
C45H50ClN7O7S
868.457000
LQBVNQSMGBZMKD-UHFFFAOYSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase, H3 lysine-36 specific
BindingDB, PubChem
BindingDB:BDBM50162774; PubChem:CID49846579
Local ready
Direct docking supported
E3L047123
BDB047123
BDBM50163387
O=C(COc1cc(O)c2c(=O)cc(-c3ccccc3)oc2c1)OCc1ccccc1
C24H18O6
402.402000
WZFYWAOWGIJOIS-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163387; PubChem:CID5429178
Local ready
Direct docking supported
E3L047124
BDB047124
BDBM50163388
CNc1ccccc(C(=O)/C=C/c2cccc(Oc3ccccc3)c2)c1=O
C23H19NO3
357.409000
ILGXCSDPVWNLLW-CCEZHUSRSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163388; PubChem:CID5852401
Local ready
Direct docking supported
E3L047125
BDB047125
2-Hydrazinylpyrimidine-4-carboxylic acid
NNc1nccc(C(=O)O)n1
C5H6N4O2
154.129000
AVMDBCMWSSIKTF-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163389; PubChem:CID83672127
Local ready
Direct docking supported
E3L047126
BDB047126
N'-(acridin-9-yl)pyridine-2-carbohydrazide
O=C(NNc1c2ccccc2nc2ccccc12)c1ccccn1
C19H14N4O
314.348000
DQDANBFGCYZFSZ-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163390; PubChem:CID610500
Local ready
Direct docking supported
E3L047127
BDB047127
6-Bromo-3-(4-methylbenzoyl)-1-benzofuran-4,5-dione
Cc1ccc(C(=O)c2coc3c2C(=O)C(=O)C(Br)=C3)cc1
C16H9BrO4
345.148000
WKICJUBXSOGMSG-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163392; PubChem:CID1736340
Local ready
Direct docking supported
E3L047128
BDB047128
BDBM50163393
Oc1ccccc1/C=N/Nc1ncc(F)c(N2CCOCC2)n1
C15H16FN5O2
317.324000
HUWDYOJFOOSSNI-GIJQJNRQSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163393; PubChem:CID135487489
Local ready
Direct docking supported
E3L047129
BDB047129
BDBM50163411
O=C1c2ccccc2C(=O)c2c1ccc1c(=O)n(-c3ccc(Cl)cc3)[nH]c21
C21H11ClN2O3
374.783000
SRNXZDOELWBLAV-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163411; PubChem:CID3126079
Local ready
Direct docking supported
E3L047130
BDB047130
9H-Xanthen-9-one, 1,4-dihydroxy-
O=c1c2ccccc2oc2c(O)ccc(O)c12
C13H8O4
228.203000
YVXJETAOWDKWOW-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163430; PubChem:CID7099919
Local ready
Direct docking supported
E3L047131
BDB047131
BDBM50163436
CCN(C1=C(Cl)C(=O)N(c2cccc(C)c2C)C1=O)c1ccccc1
C20H19ClN2O2
354.837000
YSGHYVVKRNBODQ-UHFFFAOYSA-N P29375 Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50163436; PubChem:CID992337
Local ready
Direct docking supported
E3L047132
BDB047132
BDBM50163728
Cc1oc(-c2ccccc2)nc1CCOc1ccc(CN(CC(=O)O)Cc2ccccc2)cc1
C28H28N2O4
456.542000
KBXHBLXYBPVCLB-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50163728; PubChem:CID9825302
Local ready
Direct docking supported
E3L047133
BDB047133
BDBM50163925
C[C@H](c1ccc(Cl)cc1)N1C(=O)C=C(c2ccccc2)N(CCCCC(=O)O)C(=O)[C@@H]1c1ccc(Cl)cc1
C30H28Cl2N2O4
551.470000
BHHGNJQROMKDLQ-OLILMLBXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50163925; PubChem:CID44390678
Local ready
Direct docking supported
E3L047134
BDB047134
BDBM50163926
C[C@H](c1ccc(Cl)cc1)N(C(=O)/C=C/c1ccccc1)[C@H](C(N)=O)c1ccc(Cl)cc1
C25H22Cl2N2O2
453.369000
YGZKZLOWLJRGSJ-YFULZTQESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50163926; PubChem:CID44390659
Local ready
Direct docking supported
E3L047135
BDB047135
BDBM50163927
O=C(O)C(c1ccccc1)N(Cc1ccc(C(F)(F)F)cc1)C(=O)c1cccc(I)c1
C23H17F3INO3
539.291000
QHTQZPBBQSXYLJ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50163927; PubChem:CID44390641
Local ready
Direct docking supported
E3L047136
BDB047136
BDBM50163928
C[C@H](c1ccc(Cl)cc1)N1C(=O)C=C(c2ccccc2Br)N(CCCCC(=O)O)C(=O)[C@@H]1c1ccc(Cl)cc1
C30H27BrCl2N2O4
630.366000
MPAGIHSKIGKKGZ-XBBWARJSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50163928; PubChem:CID11192949
Local ready
Direct docking supported
E3L047137
BDB047137
BDBM50164208
CCCc1cc2c(OC)noc2c(CCC)c1OC(C)(C)C(=O)O
C18H25NO5
335.400000
OOLAPGQQNIFHGH-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50164208; PubChem:CID9902264
Local ready
Direct docking supported
E3L047138
BDB047138
BDBM50164209
CCCc1cc2c(C(F)(F)F)noc2c(CCC)c1OCC(C)(C)C(=O)O
C19H24F3NO4
387.398000
RYGRTZWSBJRQOU-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50164209; PubChem:CID11383635
Local ready
Direct docking supported
E3L047139
BDB047139
BDBM50164210
CCCc1cc2c(C(F)(F)F)noc2c(CCC)c1OC(C)(C)C(=O)O
C18H22F3NO4
373.371000
RUIWUDJYVYEUJX-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50164210; PubChem:CID10292707
Local ready
Direct docking supported
E3L047140
BDB047140
BDBM50164211
CCCc1c(OC(C)(C)C(=O)O)ccc2c(C(F)(F)F)noc12
C15H16F3NO4
331.290000
JYSPMAJXLWXDMZ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50164211; PubChem:CID11416269
Local ready
Direct docking supported