E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L049981
BDB049981
BDBM50253145
[C][C][C@H]([C])[C@H]([N]C(=O)[C@H]([C][O])[N]C(=O)[C@H]([C][O])[N]C(=O)[C@H]([C][C]([C])[C])[N]C(=O)[C@H]([C][C][C][C][N])[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C@H]([C][C]C([N])=O)[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C@H]([C][C][C][C][N])[N]C(=O)[C@H]([C][C][C][C][N])[N]C(=O)[C@H]([C][C][C]N=C([N])[N])[N]C(=O)[C][N]C(=O)[C@@H]([N])[C]c1ccc([O])cc1)C(=O)[N][C@@H]([C][C]C([O])=O)C(=O)[N][C@@H]([C][O])C(=O)[N][C@@H]([C]C([O])=O)C(=O)[N][C@@H]([C]([C])[C])C([O])=O
C105H24N42O30
2353.611000
IJARULFXMRRZRY-FKXNDIMNSA-N P78352 Disks large homolog 4
BindingDB
BindingDB:BDBM50253145
Local ready
Direct docking supported
E3L049982
BDB049982
H-Glu-Ser-Asp-Val-OH
CC(C)[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C17H28N4O10
448.429000
AJXONGJARXYRDO-YVNDNENWSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253146; PubChem:CID25062886
Local ready
Direct docking supported
E3L049983
BDB049983
BDBM50253222
CC(C)[C@H](NC(=O)[C@H](CC(=O)O)N(C)C(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C18H30N4O10
462.456000
YTNSANDMIXPEOB-RMIALFOJSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253222; PubChem:CID44568990
Local ready
Direct docking supported
E3L049984
BDB049984
BDBM50253223
CN[C@@H](CCC(=O)O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CC(=O)O)C(=O)N[C@H](C(=O)O)C(C)C
C18H30N4O10
462.456000
YGZHTJCMFNVSDW-RMIALFOJSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253223; PubChem:CID44568992
Local ready
Direct docking supported
E3L049985
BDB049985
BDBM50253224
CC[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C16H26N4O10
434.402000
WNEFKHIVDFGNSU-XKNYDFJKSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253224; PubChem:CID44568993
Local ready
Direct docking supported
E3L049986
BDB049986
BDBM50253251
CNC(=O)c1nc(-c2nc(-c3cnc4ccccn34)c(C)nc2N)n(C)n1
C17H17N9O
363.385000
KNRONZUHGXIQLA-UHFFFAOYSA-N Q99570 Phosphoinositide 3-kinase regulatory subunit 4
BindingDB, PubChem
BindingDB:BDBM50253251; PubChem:CID137639139
Local ready
Direct docking supported
E3L049987
BDB049987
BDBM50253260
CC(C)(C)[C@H](NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C18H30N4O10
462.456000
YFHJRPDPJMYESB-AVWBDOJWSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253260; PubChem:CID44568997
Local ready
Direct docking supported
E3L049988
BDB049988
BDBM50253261
CC(C)[C@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C18H31N5O9
461.472000
XMNHLAFMWAEDQB-RMIALFOJSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253261; PubChem:CID44568998
Local ready
Direct docking supported
E3L049989
BDB049989
BDBM50253262
CC(C)[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C18H30N4O10
462.456000
QKIPWEADEMCLIX-RMIALFOJSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253262; PubChem:CID25062887
Local ready
Direct docking supported
E3L049990
BDB049990
BDBM50253297
CC(C)[C@H](NC(=O)[C@H](CC(N)=O)NC(=O)[C@H](CO)NC(=O)[C@@H](N)CCC(=O)O)C(=O)O
C17H29N5O9
447.445000
OWCODBVPZFHRRZ-YVNDNENWSA-N P78352 Disks large homolog 4
BindingDB, PubChem
BindingDB:BDBM50253297; PubChem:CID44569003
Local ready
Direct docking supported
E3L049991
BDB049991
BDBM50253802
Cc1cccc(Nc2cc(Cl)nc(SC(C)C(=O)O)n2)c1C
C15H16ClN3O2S
337.832000
IITOMHQCBQHKGQ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50253802; PubChem:CID11978565
Local ready
Direct docking supported
E3L049992
BDB049992
BDBM50253803
Cc1cccc(Nc2cc(Cl)nc(SC(C(=O)O)c3ccccc3)n2)c1C
C20H18ClN3O2S
399.903000
SABFOCWZUFNJNB-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50253803; PubChem:CID24828802
Local ready
Direct docking supported
E3L049993
BDB049993
BDBM50255012
CS(=O)(=O)c1ccc(CNCc2cc(C(=O)O)c(Nc3ccc(I)cc3F)c(F)c2F)cc1
C22H18F3IN2O4S
590.361000
FHSZADDMYZNJFY-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50255012; PubChem:CID44570553
Local ready
Direct docking supported
E3L049994
BDB049994
BDBM50255013
NC(=O)C[C@H](N)C(=O)NCc1cc(C(=O)O)c(Nc2ccc(I)cc2F)c(F)c1F
C18H16F3IN4O4
536.248000
HKMQIJIERJBQIP-NSHDSACASA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50255013; PubChem:CID44570554
Local ready
Direct docking supported
E3L049995
BDB049995
BDBM50255048
O=C(NN=Cc1cc(C(=O)O)c(Nc2ccc(I)cc2F)c(F)c1F)c1ccc(CO)o1
C20H13F3IN3O5
559.238000
KRHBKGFRNLMKSL-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50255048
Local ready
Direct docking supported
E3L049996
BDB049996
BDBM50255049
O=C(CS(=O)(=O)c1ccc(Cl)cc1)NN=Cc1cc(C(=O)O)c(Nc2ccc(I)cc2F)c(F)c1F
C22H14ClF3IN3O5S
651.788000
LIPBUDUJYLHQGE-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50255049
Local ready
Direct docking supported
E3L049997
BDB049997
BDBM50255183
CN[C@@H](C)C(=O)N[C@H]1CCCC[C@H]2[C@@H](Cc3ccccc3)C[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N2C1=O
C32H42N4O3
530.713000
GSYDLODTKWENBK-UZYJKHRNSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50255183; PubChem:CID25209021
Local ready
Direct docking supported
E3L049998
BDB049998
BDBM50255244
CN[C@@H](C)C(=O)N[C@H]1C/C=C\C[C@H]2[C@@H](Cc3ccccc3)C[C@@H](C(=O)N[C@@H]3CCCc4ccccc43)N2C1=O
C32H40N4O3
528.697000
XRNWGSINTQPCAV-IXSUYCQFSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50255244
Local ready
Direct docking supported
E3L049999
BDB049999
3-Phenylquinoline-8-carboxamide
NC(=O)c1cccc2cc(-c3ccccc3)cnc12
C16H12N2O
248.285000
DFGJDJRADWQKAW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50255264; PubChem:CID25208596
Local ready
Direct docking supported
E3L050000
BDB050000
3-(3-(Trifluoromethyl)phenyl)quinoline-8-carboxamide
NC(=O)c1cccc2cc(-c3cccc(C(F)(F)F)c3)cnc12
C17H11F3N2O
316.282000
SVBJVSUKCREZLI-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50255265; PubChem:CID25208597
Local ready
Direct docking supported