E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L050661
BDB050661
BDBM50273473
Cc1sc2ccccc2c1C(=O)c1ccc(OCCC[N+](C)(C)C)cc1
C22H26NO2S+
368.522000
UFIQJARLKXIASU-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 7A, Lysine-specific demethylase 5A, Lysine-specific demethylase PHF2
BindingDB, PubChem
BindingDB:BDBM50273473; PubChem:CID145946830
Local ready
Direct docking supported
E3L050662
BDB050662
BDBM50273474
CCCCc1oc2ccccc2c1C(=O)c1cc(OC)c(OCCC[N+](C)(C)C)c(OC)c1
C27H36NO5+
454.587000
QALQUZHMZUYBKH-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 5A, Lysine-specific demethylase PHF2, Lysine-specific demethylase 7A
BindingDB, PubChem
BindingDB:BDBM50273474; PubChem:CID145946815
Local ready
Direct docking supported
E3L050663
BDB050663
BDBM50273475
CCCCc1oc2ccccc2c1C(=O)c1ccc(OCCCN(C)C)cc1
C24H29NO3
379.500000
TXAGKIUQIJVRHA-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 5A, Lysine-specific demethylase 7A, Lysine-specific demethylase PHF2
BindingDB, PubChem
BindingDB:BDBM50273475; PubChem:CID145962553
Local ready
Direct docking supported
E3L050664
BDB050664
BDBM50273476
CN=C(c1ccc(OCCC[N+](C)(C)C)cc1)c1coc2ccccc12
C22H27N2O2+
351.470000
VQHCHAZGMULRHS-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 7A, Lysine-specific demethylase PHF2, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM50273476; PubChem:CID145947837
Local ready
Direct docking supported
E3L050665
BDB050665
BDBM50273477
CCCCc1oc2ccccc2c1C(=O)c1cc(F)c(OCCC[N+](C)(C)C)c(F)c1
C25H30F2NO3+
430.515000
NDEJBVXPJIEIAT-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 7A, Lysine-specific demethylase 5A, Lysine-specific demethylase PHF2
BindingDB, PubChem
BindingDB:BDBM50273477; PubChem:CID145946931
Local ready
Direct docking supported
E3L050666
BDB050666
BDBM50273478
CCCCc1oc2ccccc2c1C(=O)c1ccc(OCCC[N+](C)(C)C)cc1
C25H32NO3+
394.535000
BWWOIWLUACFPEH-UHFFFAOYSA-N O75151, P29375, Q6ZMT4 Lysine-specific demethylase 5A, Lysine-specific demethylase 7A, Lysine-specific demethylase PHF2
BindingDB, PubChem
BindingDB:BDBM50273478; PubChem:CID145946229
Local ready
Direct docking supported
E3L050667
BDB050667
BDBM50273571
CCS(=O)(=O)Nc1ccc2c(c1)C(/C(=N/c1ccc(CN3CCCCC3)cc1)c1ccccc1)C(=O)N2
C29H32N4O3S
516.667000
SGZZQKMOFHIDKW-SJCQXOIGSA-N O14965 Aurora kinase A
BindingDB
BindingDB:BDBM50273571
Local ready
Direct docking supported
E3L050668
BDB050668
BDBM50273638
CN[C@@H](C)C(=O)N[C@H]1CN(Cc2ccccc2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C34H41N5O3
567.734000
KWCRPDVMOUTMME-XPSCAIQQSA-N Q13490, Q96P09 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 8
BindingDB, PubChem
BindingDB:BDBM50273638; PubChem:CID25180312
Local ready
Direct docking supported
E3L050669
BDB050669
BDBM50273673
CN[C@@H](C)C(=O)N[C@H]1CNCC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C27H35N5O3
477.609000
KMHMGJITTBRABL-AWDZXFJFSA-N P98170, Q13490, Q96P09 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 8, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50273673; PubChem:CID25173742
Local ready
Direct docking supported
E3L050670
BDB050670
BDBM50273674
CN[C@@H](C)C(=O)N[C@H]1CN(C)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C28H37N5O3
491.636000
LTSMFEKJLOPVQW-UQAQOTMJSA-N Q13490, Q96P09 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 8
BindingDB, PubChem
BindingDB:BDBM50273674; PubChem:CID25180121
Local ready
Direct docking supported
E3L050671
BDB050671
BDBM50273680
Cc1cccc(Nc2cc(Cl)nc(SC(C)(C)C(=O)O)n2)c1C
C16H18ClN3O2S
351.859000
CWFCVRFNGHBTKX-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50273680; PubChem:CID11978570
Local ready
Direct docking supported
E3L050672
BDB050672
BDBM50273681
CCCCC(Sc1nc(Cl)cc(Nc2cccc(C)c2C)n1)C(=O)O
C18H22ClN3O2S
379.913000
CDBPVIZQDYDVOE-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50273681; PubChem:CID24816384
Local ready
Direct docking supported
E3L050673
BDB050673
2-(4,6-Diphenethoxypyrimidin-2-ylthio)acetic acid
O=C(O)CSc1nc(OCCc2ccccc2)cc(OCCc2ccccc2)n1
C22H22N2O4S
410.495000
DQEBGENLFNMXNZ-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50273682; PubChem:CID25179516
Local ready
Direct docking supported
E3L050674
BDB050674
2-(4,6-Diphenethoxypyrimidin-2-ylthio)hexanoic acid
CCCCC(Sc1nc(OCCc2ccccc2)cc(OCCc2ccccc2)n1)C(=O)O
C26H30N2O4S
466.603000
KYRBYBXVVWQIJQ-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50273683; PubChem:CID25179907
Local ready
Direct docking supported
E3L050675
BDB050675
BDBM50273698
CN[C@@H](C)C(=O)N[C@H]1CN(C(C)=O)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C29H37N5O4
519.646000
IYOZNYWYRADTNN-CTZQYXLCSA-N P98170, Q13489, Q13490, Q96P09 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 8, Baculoviral IAP repeat-containing protein 2
BindingDB, PubChem
BindingDB:BDBM50273698; PubChem:CID25180313
Local ready
Direct docking supported
E3L050676
BDB050676
BDBM50273699
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2ccccc2)CC[C@H]2CC[C@@H](C(=O)NC(c3ccccc3)c3ccccc3)N2C1=O
C35H41N5O4
595.744000
YBYZHVZWINISJO-XPSCAIQQSA-N P98170, Q13489, Q13490, Q96P09 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 8
BindingDB
BindingDB:BDBM50273699
Local ready
Direct docking supported
E3L050677
BDB050677
5-Pyridin-3-yl-1,3-dihydro-2H-indol-2-one
O=C1Cc2cc(-c3cccnc3)ccc2N1
C13H10N2O
210.236000
LRXSVYIRRDZVNQ-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM50273706; PubChem:CID12050204
Local ready
Direct docking supported
E3L050678
BDB050678
Isolissoclinotoxin B
COc1cc(CCN(C)C)c2c(c1O)SSSSS2
C11H15NO2S5
353.581000
GDCGVOKHENOREK-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50273917; PubChem:CID44588489
Local ready
Direct docking supported
E3L050679
BDB050679
N,N-dimethyl-5-methylvaracin
COc1c(C)c(CCN(C)C)c2c(c1OC)SSSSS2
C13H19NO2S5
381.635000
SMUYRADPIHAZBL-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50273918; PubChem:CID44588490
Local ready
Direct docking supported
E3L050680
BDB050680
BDBM50273919
CSc1c(CC=N)c2c3c(ccnc3c1O)-c1ccccc1N2
C18H15N3OS
321.405000
QZURCMZUPZIOHH-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50273919; PubChem:CID91934893
Local ready
Direct docking supported