E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L050901
BDB050901
BDBM50281241
CCCCNS(=O)(=O)C[C@@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)CCc1cnc[nH]1
C21H38N4O5S
458.625000
CWQIVKZLBLXURD-QKNQBKEWSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50281241; PubChem:CID44325481
Local ready
Direct docking supported
E3L050902
BDB050902
BDBM50281242
CCCCNS(=O)(=O)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1cnc[nH]1)NS(=O)(=O)CCc1ccccc1
C29H47N5O7S2
641.857000
HMLCCPLOZFQABP-LAJGZZDBSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50281242; PubChem:CID44325450
Local ready
Direct docking supported
E3L050903
BDB050903
BDBM50281243
CCCCNS(=O)(=O)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@@H](O)CC(C)C
C21H42N2O6S
450.642000
ATHDBXJUSVTRLQ-LWYYNNOASA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50281243; PubChem:CID44325307
Local ready
Direct docking supported
E3L050904
BDB050904
BDBM50281244
CCCCNS(=O)(=O)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@@H](N)Cc1cnc[nH]1
C21H39N5O5S
473.640000
LJZAXPWIVQIDQZ-LWYYNNOASA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50281244; PubChem:CID44325466
Local ready
Direct docking supported
E3L050905
BDB050905
BDBM50281636
CCC(C)[C@H](NC(=O)[C@@H](C[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](CC(N)=O)NC(=O)c1ccc2ccccc2n1)C(C)C)C(=O)NCc1ccccn1
C41H57N7O6
743.950000
ACLGFPBLVWSDHZ-KZMCYEEOSA-N P00797 Renin
BindingDB
BindingDB:BDBM50281636
Local ready
Direct docking supported
E3L050906
BDB050906
BDBM50281638
CCC(C)[C@H](NC(=O)[C@@H](C[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1cnc[nH]1)NC(=O)COc1cccc2ccccc12)C(C)C)C(=O)NCc1ccccn1
C45H61N7O6
796.026000
VIIORGGCTLITHW-BPKZVAPOSA-N P00797 Renin
BindingDB
BindingDB:BDBM50281638
Local ready
Direct docking supported
E3L050907
BDB050907
BDBM50281642
CCC(C)[C@H](NC(=O)[C@@H](C[C@H](O)[C@H](CC1CCCCC1)NC(=O)OC(C)(C)C)C(C)C)C(=O)NCc1ccccn1
C32H54N4O5
574.807000
SHXBHHDCBHQKLF-ISYMSECWSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50281642; PubChem:CID454914
Local ready
Direct docking supported
E3L050908
BDB050908
BDBM50282114
CC(C)C[C@H](NC(=O)[C@@H](N)CCCNC(=N)N)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](CCCC[N+](C)(C)C)C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](C)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CO)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)O
C74H121N24O20+
1666.930000
LZHAAGDVOJKNJU-QZPDNNCWSA-O O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50282114; PubChem:CID145956390
Local ready
Direct docking supported
E3L050909
BDB050909
BDBM50282115
C[C@H](NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)CNC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCCC[N+](C)(C)C)NC(=O)[C@@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=S)Nc1ccc(C2=C3C=CC(O)=CC3Oc3cc(O)ccc32)c(C(=O)O)c1)[C@@H](C)O)[C@@H](C)O)[C@@H](C)O)C(=O)O
C87H137N26O26S+
1995.276000
HDUFEAROPVQRMB-WITLFUPKSA-O P29375, Q03164 Lysine-specific demethylase 5A, Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM50282115
Local ready
Direct docking supported
E3L050910
BDB050910
BDBM50282157
CC(C)N(C)CCCC[C@H](NC(=O)[C@@H]1C[C@@H]2CCCC[C@@H]2N1)C(=O)N[C@@H](Cc1ccccc1)C(=O)N1CCCCC1
C33H53N5O3
567.819000
HPURZZOPLJWEKA-IIZANFQQSA-N O75530 Polycomb protein EED
BindingDB
BindingDB:BDBM50282157
Local ready
Direct docking supported
E3L050911
BDB050911
BDBM50282158
O=C(Nc1cc2c(O)c(c1)Cc1cc(S(=O)(=O)O)cc(c1O)Cc1cc(S(=O)(=O)O)cc(c1O)Cc1cc(S(=O)(=O)O)cc(c1O)C2)c1ccccc1
C35H29NO14S3
783.811000
IQLQXLWUDUABAJ-UHFFFAOYSA-N Q9H160 Inhibitor of growth protein 2
BindingDB
BindingDB:BDBM50282158
Local ready
Direct docking supported
E3L050912
BDB050912
H-Pro-Ser-Lys(Me3)-Phe-Leu-NH2
CC(C)C[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCC[N+](C)(C)C)NC(=O)[C@H](CO)NC(=O)[C@@H]1CCCN1)C(N)=O
C32H54N7O6+
632.827000
ZZEFIZCWHLCWRV-IRGGMKSGSA-O O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50282161; PubChem:CID123132930
Local ready
Direct docking supported
E3L050913
BDB050913
BDBM50282162
C[C@H](NC(=O)[C@H](CCCCN)NC(=O)CNC(=O)CNC(=O)[C@@H](NC(=O)[C@H](CO)NC(=O)[C@H](CCCCN)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@H](CCC(N)=O)NC(=O)[C@H](CCCCN(C)C)NC(=O)[C@@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=S)Nc1ccc(C2=C3C=CC(O)=CC3Oc3cc(O)ccc32)c(C(=O)O)c1)[C@@H](C)O)[C@@H](C)O)[C@@H](C)O)C(=O)O
C86H134N26O26S
1980.241000
SYPCDSAZIPUYCF-CYORGSIPSA-N P29375 Lysine-specific demethylase 5A
BindingDB
BindingDB:BDBM50282162
Local ready
Direct docking supported
E3L050914
BDB050914
BDBM50282163
CC(C)C[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCCN(C)C(C)C)NC(=O)[C@@H]1C[C@@H]2CCCC[C@@H]2N1)C(N)=O
C34H56N6O4
612.860000
QCOPPCLMRKMEKM-WPMUBMLPSA-N O75530 Polycomb protein EED
BindingDB
BindingDB:BDBM50282163
Local ready
Direct docking supported
E3L050915
BDB050915
H-Gln-Arg-Lys(Me3)-Phe-Ala-OMe
COC(=O)[C@H](C)NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCC[N+](C)(C)C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@@H](N)CCC(N)=O
C33H57N10O7+
705.882000
AETJYYFBSYAFDG-GKKOWRRISA-O O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50282164; PubChem:CID145960068
Local ready
Direct docking supported
E3L050916
BDB050916
cHexCO-Ser-Lys(Me3)-Phe-Ala-NH2
C[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CCCC[N+](C)(C)C)NC(=O)[C@H](CO)NC(=O)C1CCCCC1)C(N)=O
C31H51N6O6+
603.785000
WNDKNHLLDDUGBW-PZYJALBSSA-O O75530 Polycomb protein EED
BindingDB, PubChem
BindingDB:BDBM50282165; PubChem:CID145955728
Local ready
Direct docking supported
E3L050917
BDB050917
BDBM50282166
O=C(O)c1ccc(S(=O)(=O)Nc2cc3c(O)c(c2)Cc2cc(S(=O)(=O)O)cc(c2O)Cc2cc(S(=O)(=O)O)cc(c2O)Cc2cc(S(=O)(=O)O)cc(c2O)C3)cc1
C35H29NO17S4
863.875000
JSZMPNBCMSNMSV-UHFFFAOYSA-N Q9H160 Inhibitor of growth protein 2
BindingDB
BindingDB:BDBM50282166
Local ready
Direct docking supported
E3L050918
BDB050918
BDBM50282167
O=S(=O)(O)c1cc2c(O)c(c1)Cc1cc(S(=O)(=O)O)cc(c1O)Cc1cc(S(=O)(=O)O)cc(c1O)Cc1cc(S(=O)(=O)O)cc(c1O)C2
C28H24O16S4
744.752000
JFYBCAFLVNKHHG-UHFFFAOYSA-N Q9H160 Inhibitor of growth protein 2
BindingDB, PubChem
BindingDB:BDBM50282167; PubChem:CID644084
Local ready
Direct docking supported
E3L050919
BDB050919
BDBM50282478
CCCCc1nc2c(C)cc(C)nc2n1C1CCc2cc(-c3ccccc3-c3nnn[nH]3)ccc21
C28H29N7
463.589000
HBYVOFWUGXPDMO-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50282478; PubChem:CID19008935
Local ready
Direct docking supported
E3L050920
BDB050920
BDBM50282484
CCc1nc2c(C)cc(C)nc2n1C1CCc2cc(-c3ccccc3-c3nnn[nH]3)ccc21
C26H25N7
435.535000
PACFDFGGIPMOKL-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50282484; PubChem:CID19008901
Local ready
Direct docking supported