E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L051461
BDB051461
BDBM50300018
NC(=O)c1cccc2[nH]c(-c3ccc(-c4cnco4)cc3)nc12
C17H12N4O2
304.309000
FFFUQLICAJOHFJ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300018; PubChem:CID44541922
Local ready
Direct docking supported
E3L051462
BDB051462
BDBM50300019
NC(=O)c1cccc2[nH]c(-c3ccc(-c4c[nH]cn4)cc3)nc12
C17H13N5O
303.325000
OFNRNSWBCGLJIV-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300019; PubChem:CID44541767
Local ready
Direct docking supported
E3L051463
BDB051463
BDBM50300020
NC(=O)c1cccc2[nH]c(-c3ccc(-c4ncc[nH]4)cc3)nc12
C17H13N5O
303.325000
TZFGFYOHWMJQCL-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300020; PubChem:CID44541924
Local ready
Direct docking supported
E3L051464
BDB051464
BDBM50300021
NC(=O)c1cccc2[nH]c(-c3ccc(-c4cscn4)cc3)nc12
C17H12N4OS
320.377000
ANHUSSWFZUAVMM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300021; PubChem:CID44542210
Local ready
Direct docking supported
E3L051465
BDB051465
BDBM50300022
Cc1nc(-c2ccc(-c3nc4c(C(N)=O)cccc4[nH]3)cc2)co1
C18H14N4O2
318.336000
KSEIQLXWTBSWRU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300022; PubChem:CID44541770
Local ready
Direct docking supported
E3L051466
BDB051466
BDBM50300023
NC(=O)c1cccc2[nH]c(-c3ccc(-c4csc(N)n4)cc3)nc12
C17H13N5OS
335.392000
WYCHBHLAGKGTGC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300023; PubChem:CID44542211
Local ready
Direct docking supported
E3L051467
BDB051467
BDBM50300024
NC(=O)c1cccc2[nH]c(-c3ccc(-c4nnn[nH]4)cc3)nc12
C15H11N7O
305.301000
HYLJXBLJEMWWFA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300024; PubChem:CID44541773
Local ready
Direct docking supported
E3L051468
BDB051468
BDBM50300025
NC(=O)c1cccc2[nH]c(-c3ccc(-c4nc(=O)o[nH]4)cc3)nc12
C16H11N5O3
321.296000
HDKPPPCFAUNASD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50300025; PubChem:CID135927976
Local ready
Direct docking supported
E3L051469
BDB051469
BDBM50300028
COc1cc2nc(N3CCCN(C)CC3)nc(NC3CCN(Cc4ccccc4)CC3)c2cc1OC
C28H38N6O2
490.652000
OSXFATOLZGZLSK-UHFFFAOYSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase NSD2, Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase, H3 lysine-36 specific
BindingDB, PubChem
BindingDB:BDBM50300028; PubChem:CID25150857
Local ready
Direct docking supported
E3L051470
BDB051470
BDBM50300114
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2F)[C@@]12C(=O)Nc1cc(Cl)ccc12
C27H32Cl2FN3O4
552.474000
FYHKPZFIVNTTHR-ZZWVMVCISA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300114
Local ready
Direct docking supported
E3L051471
BDB051471
BDBM50300115
COCCOCCNC(=O)[C@@H]1N[C@H](CC(C)(C)C)[C@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
C28H34Cl2FN3O4
566.501000
PVSGKYWYWGWPIF-WZRJCJTJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300115
Local ready
Direct docking supported
E3L051472
BDB051472
BDBM50300116
CN1CCN(CCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C30H38Cl2FN5O2
590.571000
BXWXGVCDVQYCNW-HVHHDALESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300116
Local ready
Direct docking supported
E3L051473
BDB051473
BDBM50300117
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)ccc12
C27H33Cl2N3O4
534.484000
NAOQNYFVXDLIDP-NXKDEWIBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50300117; PubChem:CID44606646
Local ready
Direct docking supported
E3L051474
BDB051474
BDBM50300118
CN1CCC(CCNC(=O)[C@@H]2N[C@H](CC(C)(C)C)[C@]3(C(=O)Nc4cc(Cl)ccc43)[C@H]2c2cccc(Cl)c2F)CC1
C31H39Cl2FN4O2
589.583000
COBIADBVPGXSFP-OHMLLRHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300118
Local ready
Direct docking supported
E3L051475
BDB051475
BDBM50300119
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C27H32Cl2FN3O4
552.474000
UNXQGBMZYKHQCO-LZITZJIASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50300119; PubChem:CID25001753
Local ready
Direct docking supported
E3L051476
BDB051476
BDBM50300120
CC(C)(C)C[C@H]1N[C@@H](C(=O)NC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C26H30Cl2FN3O4
538.447000
BROUFXKDLPNALC-GTJCPKOCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300120
Local ready
Direct docking supported
E3L051477
BDB051477
BDBM50300121
CC(C)(C)C[C@H]1N[C@@H](C(=O)NCC[C@H](O)CO)[C@H](c2cccc(Cl)c2)[C@@]12C(=O)Nc1cc(Cl)c(F)cc12
C27H32Cl2FN3O4
552.474000
UNXQGBMZYKHQCO-NVHWNKAKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50300121; PubChem:CID24877503
Local ready
Direct docking supported
E3L051478
BDB051478
BDBM50300122
CSCC[C@H](NC(=O)[C@H](Cc1ccccc1)NC(=O)CCNC(=O)CCNC(=O)c1ccc2c(c1)C(=O)OC21c2ccc(O)cc2Cc2cc(O)ccc21)C(=O)NC(C)(C)C(=O)N[C@@H](Cc1ccc(O)cc1)C(=O)N[C@@H](Cc1c[nH]c2cc(Cl)ccc12)C(=O)N[C@@H](CCC(=O)O)C(=O)NC1(C(=O)N[C@@H](CC(C)C)C(=O)N[C@@H](CC(N)=O)C(N)=O)CC1
C85H97ClN14O20S
1702.309000
XZGDYCGOFMWSIH-AQMVASGMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50300122
Local ready
Direct docking supported
E3L051479
BDB051479
(2e)-2-Imino-3-Methyl-5,5-Diphenylimidazolidin-4-One
CN1C(=O)C(c2ccccc2)(c2ccccc2)N=C1N
C16H15N3O
265.316000
RNWLAFWLSSMCLN-UHFFFAOYSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50300229; PubChem:CID15054176
Local ready
Direct docking supported
E3L051480
BDB051480
BDBM50300415
CCCCCCCCCCCCSc1c(Cl)c(=O)n(CCC(=O)OC)[s+]1[O-]
C19H32ClNO4S2
438.055000
SCZPCNQHBPMVMI-UHFFFAOYSA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50300415; PubChem:CID44612939
Local ready
Direct docking supported