E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L054201
BDB054201
BDBM50365850
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CCNCc1cccc(F)c1)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C37H46FN5O3
627.805000
FVAULEYZZJJPQP-MCWJOJKXSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50365850
Local ready
Direct docking supported
E3L054202
BDB054202
BDBM50365851
CC[C@H](NC)C(=O)N[C@@H]1C(=O)N2[C@@H](CC[C@@H]1CCNCc1ccccc1F)CC[C@H]2C(=O)NC(c1ccccc1)c1ccccc1
C37H46FN5O3
627.805000
RINJWQDHHUYRSR-VMVDRLPDSA-N P98170, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM50365851
Local ready
Direct docking supported
E3L054203
BDB054203
BDBM50366114
CC(C)n1c2c(c3c1-c1ccccc1C3=O)C(=O)CCC2
C18H17NO2
279.339000
DGOKKNPUISUUGY-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50366114; PubChem:CID24764502
Local ready
Direct docking supported
E3L054204
BDB054204
BDBM50366278
CCN(CC)C(=O)Cn1cc(CN2CCN(C)CC2)c2ccc(NC(=S)NCCc3c[nH]c4ccccc34)cc21
C31H41N7OS
559.784000
OYIIIGXQIFYAHT-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366278; PubChem:CID145972675
Local ready
Direct docking supported
E3L054205
BDB054205
BDBM50366279
CN1CCN(Cc2cn(CC(=O)N3CCCCC3)c3cc(NC(=S)NCCc4c[nH]c5ccccc45)ccc23)CC1
C32H41N7OS
571.795000
MKDURIHAVNZYLM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366279; PubChem:CID145955890
Local ready
Direct docking supported
E3L054206
BDB054206
BDBM50366280
CCOC(=O)CNC(=O)Cn1cc(CN2CCN(C)CC2)c2ccc(NC(=S)NCCc3c[nH]c4ccccc34)cc21
C31H39N7O3S
589.766000
FABFCERJDWVNNE-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366280; PubChem:CID145956734
Local ready
Direct docking supported
E3L054207
BDB054207
BDBM50366281
O=C(O)CNC(=O)Cn1ccc2ccc(NC(=S)NCCc3c[nH]c4ccccc34)cc21
C23H23N5O3S
449.536000
GOWQIHZCRGJRIM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366281; PubChem:CID145971457
Local ready
Direct docking supported
E3L054208
BDB054208
BDBM50366282
CC(C)NC(=O)Cn1cc(CN2CCN(C)CC2)c2ccc(NC(=S)NCCc3c[nH]c4ccccc34)cc21
C30H39N7OS
545.757000
DCSGGGDRUYCRAM-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366282; PubChem:CID137551963
Local ready
Direct docking supported
E3L054209
BDB054209
BDBM50366283
CN1CCN(Cc2cn(CC(=O)N3CCN(C)CC3)c3cc(NC(=S)NCCc4c[nH]c5ccccc45)ccc23)CC1
C32H42N8OS
586.810000
YGDJAVKDMGRBNP-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366283; PubChem:CID145974550
Local ready
Direct docking supported
E3L054210
BDB054210
BDBM50366284
CC[C@H](C)[C@H](NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](Cc1cnc[nH]1)NC(=O)[C@H](NC(=O)[C@H](CO)NC(=O)[C@H](CCCNC(=N)N)NC(=O)CNC(=O)[C@H](C)NC(=O)[C@H](CCC(=O)O)NC(=O)[C@H](CCCCN)NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](NC(=O)[C@@H](N)CC(C)C)C(C)C)[C@@H](C)O)C(C)C)[C@@H](C)CC)C(=O)N1CCC[C@@H]1C(=O)N[C@@H](CCCNC(=N)N)C(=O)O
C82H142N26O24
1876.196000
MQJWMJOEBDXBHH-QOHSINARSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366284; PubChem:CID145953882
Local ready
Direct docking supported
E3L054211
BDB054211
BDBM50366285
COC(=O)Cn1cc(CN2CCN(C)CC2)c2ccc(NC(=S)NCCc3c[nH]c4ccccc34)cc21
C28H34N6O2S
518.687000
BHDWOYPWRVTSPF-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366285; PubChem:CID145959063
Local ready
Direct docking supported
E3L054212
BDB054212
BDBM50366286
CN1CCN(Cc2cn(CC(=O)NCC(=O)O)c3cc(NC(=S)NCCc4c[nH]c5ccccc45)ccc23)CC1
C29H35N7O3S
561.712000
KMLZFEATWIVHLH-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366286; PubChem:CID145953045
Local ready
Direct docking supported
E3L054213
BDB054213
N-(2-phenylethyl)-N'-pyridin-3-ylthiourea
S=C(NCCc1ccccc1)Nc1cccnc1
C14H15N3S
257.362000
VMCPIEORRRSZLR-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366287; PubChem:CID2725474
Local ready
Direct docking supported
E3L054214
BDB054214
BDBM50366289
CN1CCN(Cc2cn(CC(=O)N3CCOCC3)c3cc(NC(=S)NCCc4c[nH]c5ccccc45)ccc23)CC1
C31H39N7O2S
573.767000
KSDJEFBPBCSCLA-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366289; PubChem:CID135747590
Local ready
Direct docking supported
E3L054215
BDB054215
BDBM50366291
CC1CN(C(=O)Cn2cc(CN3CCN(C)CC3)c3ccc(NC(=S)NCCc4c[nH]c5ccccc45)cc32)CCO1
C32H41N7O2S
587.794000
AYQAPJBTCZCQCL-UHFFFAOYSA-N P41182 B-cell lymphoma 6 protein
BindingDB, PubChem
BindingDB:BDBM50366291; PubChem:CID145950480
Local ready
Direct docking supported
E3L054216
BDB054216
BDBM50366297
C=C1[C@@H](O)CC[C@@]2(C)[C@H]1C[C@H]1C(=O)CC[C@H]([C@H](C)CC[C@@H](C)C(C)C)[C@@]3(C)CC[C@]24O[C@]143
C29H46O3
442.684000
CXAIOGJTEZTHPI-USINDFECSA-N Q09472 Histone acetyltransferase p300
BindingDB
BindingDB:BDBM50366297
Local ready
Direct docking supported
E3L054217
BDB054217
BDBM50366305
[C]C(=[C])[C@H]([C][C]=C([C])[C])[C][C@]12[C][C@H]([C][C]=C([C])[C])C([C])([C])[C@]([C][C]=C([C])[C])(C(=O)C(C(=O)c3ccc([O])c([O])c3)=C1[O])C2=O
C38H5O6
557.452000
DOANGWFJSCDBBT-AKAMJVKKSA-N Q09472, Q92831 Histone acetyltransferase p300, Histone acetyltransferase KAT2B
BindingDB
BindingDB:BDBM50366305
Local ready
Direct docking supported
E3L054218
BDB054218
BDBM50366309
C=C1[C@@H](O)CC[C@@]2(C)[C@H]1C[C@]1(O)C(=O)CC[C@H]([C@H](C)CC[C@@H](C)C(C)C)[C@@]3(C)CC[C@]24O[C@@]413
C29H46O4
458.683000
SMXYJBQGYKOMBY-XYUYFOLPSA-N Q09472 Histone acetyltransferase p300
BindingDB
BindingDB:BDBM50366309
Local ready
Direct docking supported
E3L054219
BDB054219
BDBM50366313
C=C1[C@@H](O)CC[C@@]2(C)[C@H]1CC1=C3[C@@H]2CC[C@]3(C)[C@@H]([C@H](C)CC[C@@H](C)C(C)C)CCC1=O
C29H46O2
426.685000
LMPCTOZUSBHCDD-RPYITFMVSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50366313; PubChem:CID145955376
Local ready
Direct docking supported
E3L054220
BDB054220
BDBM50366332
C=C1[C@@H](O)CC[C@]2(C)[C@H]3CC[C@@]4(C)[C@]35O[C@]4([C@H](C)CC[C@@H](C)C(C)C)CCC(=O)[C@@H]5C[C@@H]12
C29H46O3
442.684000
LTKPGLGDCJUKLL-RMLMQOSZSA-N Q09472 Histone acetyltransferase p300
BindingDB
BindingDB:BDBM50366332
Local ready
Direct docking supported