E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L054821
BDB054821
BDBM50387944
O=C(c1cc(Cc2n[nH]c(=O)c3c2NCCC3)ccc1F)N1CCN(c2ccccn2)CC1
C24H25FN6O2
448.502000
MRVGWOBRIRYOAG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50387944; PubChem:CID25117637
Local ready
Direct docking supported
E3L054822
BDB054822
BDBM50387945
O=C(c1cc(Cc2n[nH]c(=O)c3c2NCCC3)ccc1F)N1CCN(c2cnccn2)CC1
C23H24FN7O2
449.490000
YPTKEKWQKTUVGP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50387945; PubChem:CID25122607
Local ready
Direct docking supported
E3L054823
BDB054823
BDBM50387946
O=C(c1cc(Cc2n[nH]c(=O)c3c2NCCC3)ccc1F)N1CCN(c2ncccn2)CC1
C23H24FN7O2
449.490000
ZSUOWOIPJBDJFM-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50387946; PubChem:CID25122977
Local ready
Direct docking supported
E3L054824
BDB054824
BDBM50387947
CCNC(=O)c1cc(Cc2n[nH]c(=O)c3c2NCCC3)ccc1F
C17H19FN4O2
330.363000
LKMJEBNXTOUPSB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50387947; PubChem:CID25002931
Local ready
Direct docking supported
E3L054825
BDB054825
BDBM50387948
O=C(c1cc(Cc2n[nH]c(=O)c3c2NCCC3)ccc1F)N1CCN(c2cccnc2)CC1
C24H25FN6O2
448.502000
GCRQDGOVBJEVCT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50387948; PubChem:CID25120129
Local ready
Direct docking supported
E3L054826
BDB054826
BDBM50388005
O=C1NC(=S)NC1=Cc1c[nH]c2ccccc12
C12H9N3OS
243.291000
TZKUYIZWDAKOCL-UHFFFAOYSA-N P35869 Aryl hydrocarbon receptor
BindingDB
BindingDB:BDBM50388005
Local ready
Direct docking supported
E3L054827
BDB054827
TC Lpa5 4
COc1cccc(-n2nc(C(=O)O)cc2-c2ccc(C3CCCCC3)c(Cl)c2)c1
C23H23ClN2O3
410.901000
BNALUYKEGYUHQC-UHFFFAOYSA-N O96028, Q96L73, Q9BZ95 Histone-lysine N-methyltransferase, H3 lysine-36 specific, Histone-lysine N-methyltransferase NSD3, Histone-lysine N-methyltransferase NSD2
BindingDB, PubChem
BindingDB:BDBM50388091; PubChem:CID66552906
Local ready
Direct docking supported
E3L054828
BDB054828
BDBM50388626
CC[C@@H]([C@H](C)O)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C25H29Cl2NO4
478.416000
YUALYRLIFVPOHL-VPLUBSIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50388626; PubChem:CID56965957
Local ready
Direct docking supported
E3L054829
BDB054829
BDBM50388968
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)NCC(c1ccccc1)c1ccccc1)C1CCCCC1
C31H42N4O3
518.702000
FDYCYWOLTSESDK-FAQZDJIUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388968; PubChem:CID57522925
Local ready
Direct docking supported
E3L054830
BDB054830
BDBM50388969
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)NCC(c1ccccc1)c1ccccc1)C(C)C
C28H38N4O3
478.637000
JONNIXCNDNCDHK-OPXMRZJTSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388969; PubChem:CID57522798
Local ready
Direct docking supported
E3L054831
BDB054831
BDBM50388970
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CSC[C@H]1C(=O)NCC(c1ccccc1)c1ccccc1)C1CCCCC1
C30H40N4O3S
536.742000
VKVITVHQCQZPNY-PUUVEUEGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388970; PubChem:CID57522799
Local ready
Direct docking supported
E3L054832
BDB054832
BDBM50388971
CC(C)[C@H](NC(=O)[C@H](C)NCC1CC1)C(=O)N1CCC[C@H]1C(=O)NCC(c1ccccc1)c1ccccc1
C31H42N4O3
518.702000
SDUJONKIPUMXGG-FAQZDJIUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388971; PubChem:CID57522923
Local ready
Direct docking supported
E3L054833
BDB054833
BDBM50388972
CC(C)[C@H](NC(=O)[C@H](C)NC[C@H](O)CO)C(=O)N1CCC[C@H]1C(=O)NCC(c1ccccc1)c1ccccc1
C30H42N4O5
538.689000
CULLTURVHZXDJG-OIMINJBOSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388972; PubChem:CID57522924
Local ready
Direct docking supported
E3L054834
BDB054834
Me-Ala-Chg-Pro-NHBn(4-Cl)
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)NCc1ccc(Cl)cc1)C1CCCCC1
C24H35ClN4O3
463.022000
MNWPVYOXWIATDM-NDXORKPFSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388973; PubChem:CID57522926
Local ready
Direct docking supported
E3L054835
BDB054835
BDBM50388974
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)Nc1snnc1-c1ccccc1)c1ccccc1
C25H28N6O3S
492.605000
YMBRHCWKLURLLM-LRQRDZAKSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50388974; PubChem:CID57522797
Local ready
Direct docking supported
E3L054836
BDB054836
BDBM50389078
COC[C@H]1COc2ccc(-c3nnc(SCc4ccc(-c5ccccc5C#N)cc4)o3)cc2O1
C26H21N3O4S
471.538000
BDRSCIWOUKYOAH-NRFANRHFSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50389078; PubChem:CID57523095
Local ready
Direct docking supported
E3L054837
BDB054837
BDBM50389079
N#Cc1cc(F)ccc1-c1ccc(CSc2nnc(-c3ccc4c(c3)OCO4)o2)cc1
C23H14FN3O3S
431.448000
AYPKOBSJMAUBFQ-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50389079; PubChem:CID57522817
Local ready
Direct docking supported
E3L054838
BDB054838
BDBM50389080
N#Cc1ccc(-c2ccc(CSc3nnc(-c4ccc5c(c4)OCO5)o3)cc2)cc1
C23H15N3O3S
413.458000
BRBGAJDUHBVSLV-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50389080; PubChem:CID57522818
Local ready
Direct docking supported
E3L054839
BDB054839
BDBM50389081
N#Cc1ccccc1-c1ccc(CSc2nnc(-c3ccc4c(c3)OCCO4)o2)cc1
C24H17N3O3S
427.485000
DDVZOQBOMNLWSS-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50389081; PubChem:CID57522819
Local ready
Direct docking supported
E3L054840
BDB054840
BDBM50389082
N#Cc1ccccc1-c1ccc(CSc2nnc(-c3ccncc3)o2)cc1
C21H14N4OS
370.437000
MBDKLKUFQIFGCR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50389082; PubChem:CID30291292
Local ready
Direct docking supported