E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L055041
BDB055041
8-Hydroxy-5-quinolinecarboxylic acid
O=C(O)c1ccc(O)c2ncccc12
C10H7NO3
189.170000
JGRPKOGHYBAVMW-UHFFFAOYSA-N P41229 Lysine-specific demethylase 5C
BindingDB, PubChem
BindingDB:BDBM50396018; PubChem:CID459617
Local ready
Direct docking supported
E3L055042
BDB055042
BDBM50396019
O=C(O)c1ccnc(-c2cc(C(=O)NCCc3ccccc3)ccn2)c1
C20H17N3O3
347.374000
DSGOLESVOJUGOK-UHFFFAOYSA-N P29375, P41229, Q9BY66 Lysine-specific demethylase 5A, Lysine-specific demethylase 5C, Lysine-specific demethylase 5D
BindingDB, PubChem
BindingDB:BDBM50396019; PubChem:CID45378188
Local ready
Direct docking supported
E3L055043
BDB055043
Chetomin
CN1C(=O)[C@]2(Cc3cn([C@]45C[C@@]67SS[C@@](CO)(C(=O)N6[C@H]4Nc4ccccc45)N(C)C7=O)c4ccccc34)SS[C@@]1(CO)C(=O)N2C
C31H30N6O6S4
710.885000
ZRZWBWPDBOVIGQ-YWZWRZHGSA-N Q09472 Hypoxia-inducible factor 1-alpha
BindingDB, PubChem
BindingDB:BDBM50396027; PubChem:CID10417379
Local ready
Direct docking supported
E3L055044
BDB055044
Kcn-1
COc1ccc(S(=O)(=O)N(Cc2ccc3c(c2)C=CC(C)(C)O3)c2ccccc2)cc1OC
C26H27NO5S
465.571000
IPZJNJPAVPZHJM-UHFFFAOYSA-N Q09472 Histone acetyltransferase p300, Hypoxia-inducible factor 1-alpha
BindingDB, PubChem
BindingDB:BDBM50396040; PubChem:CID16097752
Local ready
Direct docking supported
E3L055045
BDB055045
BDBM50396170
O=C(O)CSc1cc(NS(=O)(=O)c2ccc(C(=O)O)cc2)c2ccccc2c1O
C19H15NO7S2
433.463000
CIERPRDYPKVDJO-UHFFFAOYSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50396170; PubChem:CID1652812
Local ready
Direct docking supported
E3L055046
BDB055046
BDBM50396243
CC(C)NC(=O)[C@H]1CC[C@@H](n2c(NC(=O)c3ccc(F)cc3)nc3ccc(CN4CCC(C(C)(C)O)CC4)cc32)CC1
C33H44FN5O3
577.745000
WSTUJEXAPHIEIM-FEGDYQJNSA-N P51617 Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50396243
Local ready
Direct docking supported
E3L055047
BDB055047
BDBM50396263
CC(C)NC(=O)[C@H]1CC[C@@H](n2c(NC(=O)c3cc(F)cc(F)c3)nc3ccc(CN4CCC(C(C)(C)O)CC4)cc32)CC1
C33H43F2N5O3
595.735000
GZYCQQBRSRIFII-JAQLMMITSA-N P51617 Interleukin-1 receptor-associated kinase 1
BindingDB
BindingDB:BDBM50396263
Local ready
Direct docking supported
E3L055048
BDB055048
BDBM50396747
Cc1oc(C(N)=O)cc1COc1ccccc1C(N)=O
C14H14N2O4
274.276000
LHNKAKMIKQLNCA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50396747; PubChem:CID823807
Local ready
Direct docking supported
E3L055049
BDB055049
PRMTs inhibitor A36
O=C(c1ccc(O)c(NC(=O)c2cccc3ccccc23)c1)c1ccc(O)c(NC(=O)c2cccc3ccccc23)c1
C35H24N2O5
552.586000
OTADGXGGNIAKDM-UHFFFAOYSA-N Q09472 Histone acetyltransferase p300
BindingDB, PubChem
BindingDB:BDBM50397030; PubChem:CID3683950
Local ready
Direct docking supported
E3L055050
BDB055050
BDBM50397771
CC[C@@H](C(=O)OC(C)(C)C)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C28H33Cl2NO5
534.480000
BTIJKFCQUAULPU-YEPCPMPXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397771; PubChem:CID56591154
Local ready
Direct docking supported
E3L055051
BDB055051
BDBM50397772
CC[C@@H](CO)N1C(=O)[C@@](C)(CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C24H27Cl2NO4
464.389000
PSVIJRZZFHPPFN-LNGMVNIQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397772; PubChem:CID58573876
Local ready
Direct docking supported
E3L055052
BDB055052
BDBM50397774
CC[C@@H](C(=O)OC(C)(C)C)N1C(=O)[C@@](C)(Cc2nnn[nH]2)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C28H33Cl2N5O3
558.510000
JJARPYJBPOGMTN-YEPCPMPXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397774; PubChem:CID67998380
Local ready
Direct docking supported
E3L055053
BDB055053
BDBM50397776
CC[C@@H](C(=O)OC(C)(C)C)N1C(=O)[C@@H](CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C27H31Cl2NO5
520.453000
ZEMLYWMOSZRCQL-UWSZBUKDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397776; PubChem:CID56591324
Local ready
Direct docking supported
E3L055054
BDB055054
BDBM50397777
CCOC(=O)[C@H](CC)N1C(=O)[C@@H](CC(=O)O)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
C25H27Cl2NO5
492.399000
JFUTVACYJYKVDU-PIBIMKELSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397777; PubChem:CID56591304
Local ready
Direct docking supported
E3L055055
BDB055055
BDBM50397778
O=C(O)C[C@H]1C[C@H](c2cccc(Cl)c2)[C@@H](c2ccc(Cl)cc2)N(CC2CC2)C1=O
C23H23Cl2NO3
432.347000
OMAPWASVHLHIRY-NQSCKRDGSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50397778; PubChem:CID56591370
Local ready
Direct docking supported
E3L055056
BDB055056
BDBM50397960
NC(=O)c1cccc(NC(=O)/C=C\C(=O)O)c1
C11H10N2O4
234.211000
GNFSYBNDPOBXLJ-PLNGDYQASA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50397960; PubChem:CID2058875
Local ready
Direct docking supported
E3L055057
BDB055057
(2E)-4-[(3-carbamoylphenyl)amino]-4-oxobut-2-enoic acid
NC(=O)c1cccc(NC(=O)/C=C/C(=O)O)c1
C11H10N2O4
234.211000
GNFSYBNDPOBXLJ-SNAWJCMRSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50397961; PubChem:CID717725
Local ready
Direct docking supported
E3L055058
BDB055058
Epicept NP-1
Cc1ccc(NCCCN)c([N+](=O)[O-])c1
C10H15N3O2
209.249000
FKZUPMCBVURANR-UHFFFAOYSA-N Q92831 Histone acetyltransferase KAT2B
BindingDB, PubChem
BindingDB:BDBM50398244; PubChem:CID5276854
Local ready
Direct docking supported
E3L055059
BDB055059
BDBM50398351
CCC1=C[C@@](CC)(C[C@H](/C=C/[C@H](C)O)CC)O/C1=C\C(=O)OC
C19H30O4
322.445000
YNPVSGZQMXBKIO-CEJKPMKJSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50398351; PubChem:CID66575622
Local ready
Direct docking supported
E3L055060
BDB055060
BDBM50398352
CCC(=CCC(C)=O)C[C@]1(CC)C=C(CC)C(=O)O1
C16H24O3
264.365000
WDYOCQRCAMEENX-MRXNPFEDSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB
BindingDB:BDBM50398352
Local ready
Direct docking supported