E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L056201
BDB056201
5-amino-3-thiophen-2-yl-2H-isoquinolin-1-one
Nc1cccc2c(=O)[nH]c(-c3cccs3)cc12
C13H10N2OS
242.303000
INTOBQBKQVZYNK-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50438609; PubChem:CID71769290
Local ready
Direct docking supported
E3L056202
BDB056202
H-Ala-Val-Pro-Phg-Tyr-NH(2)
CC(C)[C@H](NC(=O)[C@H](C)N)C(=O)N1CCC[C@H]1C(=O)N[C@H](C(=O)N[C@@H](Cc1ccc(O)cc1)C(N)=O)c1ccccc1
C30H40N6O6
580.686000
AHRUXJSHORHSLD-WCJQXVFBSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50438755; PubChem:CID73346661
Local ready
Direct docking supported
E3L056203
BDB056203
Me-Ala-Val-Pro-Phe-Tyr-NH2
CN[C@@H](C)C(=O)N[C@H](C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccc(O)cc1)C(N)=O)C(C)C
C32H44N6O6
608.740000
MRZHVEOOXLFXGL-KKASSDGMSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50438756; PubChem:CID73352205
Local ready
Direct docking supported
E3L056204
BDB056204
Ala-Val-Pro-Phe-Tyr-NH2
CC(C)[C@H](NC(=O)[C@H](C)N)C(=O)N1CCC[C@H]1C(=O)N[C@@H](Cc1ccccc1)C(=O)N[C@@H](Cc1ccc(O)cc1)C(N)=O
C31H42N6O6
594.713000
GYRSNJHDXDSICK-YPOOPGCJSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50438757; PubChem:CID73346078
Local ready
Direct docking supported
E3L056205
BDB056205
9-Chloro-10-phenylpyrimido[4,5-b]quinoline-2,4-dione
O=c1nc2n(-c3ccccc3)c3c(Cl)cccc3cc-2c(=O)[nH]1
C17H10ClN3O2
323.739000
YVSMZEICTKINIT-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50438877; PubChem:CID71818716
Local ready
Direct docking supported
E3L056206
BDB056206
BDBM50439249
CC(C)C[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccccn1
C28H38ClN5O2
512.098000
DOPWMPRIRWTOOD-YZUZCNPQSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439249; PubChem:CID60162599
Local ready
Direct docking supported
E3L056207
BDB056207
BDBM50439250
Cc1ccccc1N1CC(C)(C)N([C@H]2CNC[C@@H](C(=O)N[C@H](CC(C)C)c3ccc(F)cn3)C2)CC1=O
C29H40FN5O2
509.670000
SURFEDDEQIGIAF-QQKQFIJSSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439250; PubChem:CID50914590
Local ready
Direct docking supported
E3L056208
BDB056208
BDBM50439251
Cc1ccc(F)cc1N1CC(C)(C)N([C@H]2CNC[C@@H](C(=O)N[C@H](CC(C)C)c3ccc(F)cn3)C2)CC1=O
C29H39F2N5O2
527.660000
AYJWYXSNEYSBKE-QUURXOELSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439251; PubChem:CID60162861
Local ready
Direct docking supported
E3L056209
BDB056209
BDBM50439252
CC(C)C[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ncco1
C26H36ClN5O3
502.059000
IPWZYHHAGSNUQN-QKNQBKEWSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439252; PubChem:CID72164592
Local ready
Direct docking supported
E3L056210
BDB056210
BDBM50439253
CC(C)C[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccno1
C26H36ClN5O3
502.059000
VPWKOWNFRQOUAP-QKNQBKEWSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439253; PubChem:CID72164590
Local ready
Direct docking supported
E3L056211
BDB056211
BDBM50439254
CC(C)C[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1cncc(F)c1
C28H37ClFN5O2
530.088000
HQBDJWJDMKKWJP-BGWNEDDSSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439254; PubChem:CID60162601
Local ready
Direct docking supported
E3L056212
BDB056212
BDBM50439255
CC(C)C[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccc(F)cn1
C28H37ClFN5O2
530.088000
ARAQVWPNKFJBQQ-XZDHIHRUSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439255; PubChem:CID69918384
Local ready
Direct docking supported
E3L056213
BDB056213
BDBM50439256
CC[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccc(Cl)cc1
C27H34Cl2N4O2
517.501000
KBQYJISKDVCQOT-XKCSPQBFSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439256; PubChem:CID72164473
Local ready
Direct docking supported
E3L056214
BDB056214
BDBM50439257
CC[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1cccc(Cl)c1
C27H34Cl2N4O2
517.501000
NXDABLYXZOOKHQ-XKCSPQBFSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439257; PubChem:CID72164471
Local ready
Direct docking supported
E3L056215
BDB056215
BDBM50439258
CC[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccc(F)cc1
C27H34ClFN4O2
501.046000
DIYNMGLMCBQYIN-XKCSPQBFSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439258; PubChem:CID50914449
Local ready
Direct docking supported
E3L056216
BDB056216
BDBM50439259
CC[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1cccc(F)c1
C27H34ClFN4O2
501.046000
ZJTUIPGXPDJATD-XKCSPQBFSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439259; PubChem:CID50914448
Local ready
Direct docking supported
E3L056217
BDB056217
BDBM50439260
CC[C@@H](NC(=O)[C@@H]1CNC[C@H](N2CC(=O)N(c3ccccc3Cl)CC2(C)C)C1)c1ccccc1F
C27H34ClFN4O2
501.046000
RMTLXCHQKBJUIA-YCRNBWNJSA-N P00797 Renin
BindingDB, PubChem
BindingDB:BDBM50439260; PubChem:CID50914306
Local ready
Direct docking supported
E3L056218
BDB056218
6-(2,9-Diazaspiro[5.5]undecan-9-Yl)-9h-Purine
c1nc(N2CCC3(CCCNC3)CC2)c2[nH]cnc2n1
C14H20N6
272.356000
ZXMGQAIKNOIWHC-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50439463; PubChem:CID70789255
Local ready
Direct docking supported
E3L056219
BDB056219
6-(1,9-Diazaspiro[5.5]undecan-9-Yl)-9h-Purine
c1nc(N2CCC3(CCCCN3)CC2)c2[nH]cnc2n1
C14H20N6
272.356000
SLPPJSSITOXUMX-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50439464; PubChem:CID70789254
Local ready
Direct docking supported
E3L056220
BDB056220
BDBM50439465
O=C(O)C1CCC2(CCN(c3ncnc4nc[nH]c34)CC2)NC1
C15H20N6O2
316.365000
DKDRBYGOIPHLMM-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50439465; PubChem:CID72164208
Local ready
Direct docking supported