E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L056361
BDB056361
BDBM50441826
CN[C@@H](C)C(=O)N[C@@H]1C(=O)N(Cc2c(OC)ccc3cc(Br)ccc23)c2ccccc2N(C(=O)CS(C)(=O)=O)[C@H]1C
C29H33BrN4O6S
645.576000
QWYSUQIZLNHTSH-VFUKXHBFSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50441826
Local ready
Direct docking supported
E3L056362
BDB056362
BDBM50441827
CN[C@@H](C)C(=O)N[C@@H]1C(=O)N(Cc2c(OC)ccc3c(Br)cccc23)c2ccccc2N(C(=O)CS(C)(=O)=O)[C@H]1C
C29H33BrN4O6S
645.576000
PXWZNFSPEPDNTD-VFUKXHBFSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM50441827
Local ready
Direct docking supported
E3L056363
BDB056363
BDBM50441828
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2cnccn2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C30H29BrN6O4
617.504000
WNFDOEFATWINQC-UUOWRZLLSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441828; PubChem:CID72711724
Local ready
Direct docking supported
E3L056364
BDB056364
BDBM50441829
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(F)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C32H30BrFN4O4
633.518000
IYAXXUOLQDPMLM-SIBVEZHUSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441829; PubChem:CID72711251
Local ready
Direct docking supported
E3L056365
BDB056365
BDBM50441830
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)Cc2cccnc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C32H32BrN5O4
630.543000
YEFFLKUAMCNGBI-FNZWTVRRSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441830; PubChem:CID72711722
Local ready
Direct docking supported
E3L056366
BDB056366
BDBM50441831
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C)o2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C31H31BrN4O5
619.516000
DFEWVWLUJFZIAY-CYFREDJKSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441831; PubChem:CID72711926
Local ready
Direct docking supported
E3L056367
BDB056367
BDBM50441832
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(S(C)(=O)=O)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H33BrN4O6S
693.620000
ODNRMXZHMWXBTG-DCFHFQCYSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441832; PubChem:CID72711481
Local ready
Direct docking supported
E3L056368
BDB056368
BDBM50441833
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccc(C)cc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C33H33BrN4O4
629.555000
KTHDFFITHWGQIL-IDISGSTGSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441833; PubChem:CID72711479
Local ready
Direct docking supported
E3L056369
BDB056369
BDBM50441834
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)c2ccccc2)c2ccccc2N(Cc2c(OC)ccc3cc(Br)ccc23)C1=O
C32H31BrN4O4
615.528000
VEPLHDWLOOVFAN-FNZWTVRRSA-N P98170 E3 ubiquitin-protein ligase XIAP
BindingDB, PubChem
BindingDB:BDBM50441834; PubChem:CID72711249
Local ready
Direct docking supported
E3L056370
BDB056370
BDBM50442526
O=C(CSc1nc2sc3c(c2c(=O)[nH]1)CCC3)N(CCO)CCO
C15H19N3O4S2
369.468000
ZJFAWHHRLUODQT-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50442526; PubChem:CID1577619
Local ready
Direct docking supported
E3L056371
BDB056371
BDBM50442527
O=C1N[C@@H]2N(Cc3ccccc3C23CCOCC3)c2ccccc21
C20H20N2O2
320.392000
QTQPAYUBEVRWNK-LJQANCHMSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50442527; PubChem:CID1556947
Local ready
Direct docking supported
E3L056372
BDB056372
BDBM50442528
N#Cc1c(-c2ccccc2)cn2c1[nH]c(=O)c1ccccc12
C18H11N3O
285.306000
DBKOTQQQUHAZOB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50442528; PubChem:CID354460
Local ready
Direct docking supported
E3L056373
BDB056373
BDBM50442529
Cc1sc2nc(SCC(=O)N3CCN(CCO)CC3)[nH]c(=O)c2c1C
C16H22N4O3S2
382.511000
FPIMAZZKTLCEPA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50442529; PubChem:CID1157122
Local ready
Direct docking supported
E3L056374
BDB056374
BDBM50442530
O=C1N[C@H]2Cc3ccccc3CN2c2ccccc21
C16H14N2O
250.301000
DVRUWQOQMFRZES-OAHLLOKOSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50442530; PubChem:CID687511
Local ready
Direct docking supported
E3L056375
BDB056375
BDBM50442757
CN(C)c1ccc(Oc2cc(O)cc(O)c2-c2cc(C(=O)NC3CCN(C4CCC5(CC4)OCCO5)CC3)no2)cc1
C31H38N4O7
578.666000
DPZWKZQIGWCTDT-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50442757; PubChem:CID136254389
Local ready
Direct docking supported
E3L056376
BDB056376
BDBM50442758
CC(C)Nc1ccc(Oc2cc(O)cc(O)c2-c2cc(C(=O)NC3CCN(C)CC3)no2)cc1
C25H30N4O5
466.538000
PFINYWQVHGQFKS-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50442758; PubChem:CID136219394
Local ready
Direct docking supported
E3L056377
BDB056377
BDBM50442759
CN1CCC(NC(=O)c2cc(-c3c(O)cc(O)cc3Oc3ccc(N(C)C)cc3)on2)CC1
C24H28N4O5
452.511000
VUOFPKJWKCCHBI-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50442759; PubChem:CID136013680
Local ready
Direct docking supported
E3L056378
BDB056378
Nms-E973
CN1CCC(NC(=O)c2cc(-c3c(O)cc(O)cc3Oc3ccc([N+](=O)[O-])cc3)on2)CC1
C22H22N4O7
454.439000
YLQODGGPIHWTHR-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50442760; PubChem:CID135566652
Local ready
Direct docking supported
E3L056379
BDB056379
BDBM50442778
O=c1nc2n(Cc3ccccc3)c3c(C(F)(F)F)cccc3cc-2c(=O)[nH]1
C19H12F3N3O2
371.318000
KJINGTBKIBXJOF-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50442778; PubChem:CID72697719
Local ready
Direct docking supported
E3L056380
BDB056380
BDBM50442779
Cc1ccc(-n2c3nc(=O)[nH]c(=O)c-3cc3cccc(C(F)(F)F)c32)cc1
C19H12F3N3O2
371.318000
QDTZUKDTZXNOEL-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM50442779; PubChem:CID73357201
Local ready
Direct docking supported