E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L056981
BDB056981
BDBM50459879
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCOCCOCCOCCNC(=O)C[C@@H]2N=C(c3ccc(Cl)cc3)c3c(sc(C)c3C)-n3c(C)nnc32)C(C)(C)C)cc1
C51H64ClN9O9S2
1046.714000
LSELSHXLKGXPPF-BOBBFQORSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50459879
Local ready
Direct docking supported
E3L056982
BDB056982
BDBM50459880
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCOCCOCCNC(=O)C[C@@H]2N=C(c3ccc(Cl)cc3)c3c(sc(C)c3C)-n3c(C)nnc32)C(C)(C)C)cc1
C49H60ClN9O8S2
1002.661000
PTAMRJLIOCHJMQ-PYNGZGNASA-N P40337, Q15369 Elongin-C, von Hippel-Lindau disease tumor suppressor
BindingDB
BindingDB:BDBM50459880
Local ready
Direct docking supported
E3L056983
BDB056983
BDBM50459881
CC(=O)N1c2ccc(-c3ccc(C(=O)NCCOCCOCCOCCOCC(=O)N[C@H](C(=O)N4C[C@H](O)C[C@H]4C(=O)NCc4ccc(-c5scnc5C)cc4)C(C)(C)C)cc3)cc2[C@H](Nc2ccc(Cl)cc2)C[C@@H]1C
C57H70ClN7O10S
1080.746000
UHWNJFZTYJNBAN-HYXXSBGTSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50459881
Local ready
Direct docking supported
E3L056984
BDB056984
BDBM50459896
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(C4CC4)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)C(C)(C)C)cc1
C56H79N9O9S
1054.369000
BBLUCKCGFGRHBM-PNADFZFASA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459896
Local ready
Direct docking supported
E3L056985
BDB056985
TBK1 PROTAC 3i
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(Br)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)C(C)(C)C)cc1
C53H74BrN9O9S
1093.200000
QMGHHBHPDDAGGO-IIWOMYBWSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB, PubChem
BindingDB:BDBM50459898; PubChem:CID124108661
Local ready
Direct docking supported
E3L056986
BDB056986
BDBM50459899
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C)NC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(Br)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)cc1
C50H68BrN9O9S
1051.119000
SKNABLAZUJHUQD-XPNGYUDYSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459899
Local ready
Direct docking supported
E3L056987
BDB056987
BDBM50459905
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)CNC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(Br)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)cc1
C49H66BrN9O9S
1037.092000
RHMRGNADRCTXDD-QHIUNZLJSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459905
Local ready
Direct docking supported
E3L056988
BDB056988
BDBM50459906
CCC[C@H](NC(=O)COCCCOCCCCOCCCOc1ccc(Nc2ncc(Br)c(NCCCN(C)C(=O)C3CCC3)n2)cc1)C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1
C52H72BrN9O9S
1079.173000
RMEVTEIDHGHTFH-AFCPVBLQSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459906
Local ready
Direct docking supported
E3L056989
BDB056989
BDBM50459907
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(Br)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)C(C)C)cc1
C52H72BrN9O9S
1079.173000
BVZVRIHXPPJLEK-RPBINQBJSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459907
Local ready
Direct docking supported
E3L056990
BDB056990
BDBM50459909
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@H](O)CN2C(=O)[C@@H](NC(=O)COCCCOCCCCOCCCOc2ccc(Nc3ncc(Br)c(NCCCN(C)C(=O)C4CCC4)n3)cc2)C(C)(C)C)cc1
C53H74BrN9O9S
1093.200000
QMGHHBHPDDAGGO-JTTRWUFTSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459909
Local ready
Direct docking supported
E3L056991
BDB056991
BDBM50459913
CC[C@H](NC(=O)COCCCOCCCCOCCCOc1ccc(Nc2ncc(Br)c(NCCCN(C)C(=O)C3CCC3)n2)cc1)C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1
C51H70BrN9O9S
1065.146000
PAVSYJSRMMUDDB-ANXVSDTMSA-N P40337, Q15369, Q15370 Hypoxia-inducible factor 1-alpha
BindingDB
BindingDB:BDBM50459913
Local ready
Direct docking supported
E3L056992
BDB056992
BDBM50459942
CC(=O)N[C@@H](C)C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1
C21H26N4O4S
430.530000
JKHAXURJIZDRKK-VHSSKADRSA-N P40337, P62877, Q13617, Q15369 Cullin-2, von Hippel-Lindau disease tumor suppressor, Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459942; PubChem:CID72734456
Local ready
Direct docking supported
E3L056993
BDB056993
BDBM50459945
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C2CCC2)C(C)(C)C)cc1
C27H36N4O4S
512.676000
DKNMIOWXDLCWDG-FUPPJEDESA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50459945
Local ready
Direct docking supported
E3L056994
BDB056994
(S,R,S)-AHPC-Boc
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)OC(C)(C)C)C(C)(C)C)cc1
C27H38N4O5S
530.691000
PKNFPFFOAWITLF-RZUBCFFCSA-N Q15369 Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459946; PubChem:CID117727555
Local ready
Direct docking supported
E3L056995
BDB056995
(S,R,S)-Ahpc-CO-C1-OH
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)CO)C(C)(C)C)cc1
C24H32N4O5S
488.610000
OFCMFZVSIVJIET-LVCYWYKZSA-N Q15369 Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459947; PubChem:CID129900321
Local ready
Direct docking supported
E3L056996
BDB056996
BDBM50459948
CCC(=O)N[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1)C(C)(C)C
C25H34N4O4S
486.638000
DAQZMDAVCMVVFQ-XQBPLPMBSA-N P40337, P62877, Q13617, Q15369 Cullin-2, von Hippel-Lindau disease tumor suppressor, Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459948; PubChem:CID122528991
Local ready
Direct docking supported
E3L056997
BDB056997
BDBM50459949
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C2CC2)C(C)(C)C)cc1
C26H34N4O4S
498.649000
TXHVAXXHWXOMKR-RZUBCFFCSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50459949
Local ready
Direct docking supported
E3L056998
BDB056998
Tfa-Gly(tBu)-Hyp-Unk
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C(F)(F)F)C(C)(C)C)cc1
C24H29F3N4O4S
526.581000
LDFHQQVQPPLUDX-ZIFCJYIRSA-N Q15369 Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459950; PubChem:CID145986800
Local ready
Direct docking supported
E3L056999
BDB056999
BDBM50459951
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C(C)(C)F)C(C)(C)C)cc1
C26H35FN4O4S
518.655000
QZNQKYSTRCIAKT-SVFBPWRDSA-N Q15369 Elongin-C
BindingDB, PubChem
BindingDB:BDBM50459951; PubChem:CID145986595
Local ready
Direct docking supported
E3L057000
BDB057000
BDBM50459952
CC(=O)N(C)[C@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C)cc1)C(C)(C)C
C25H34N4O4S
486.638000
IIPLOHQVELTIPV-RZUBCFFCSA-N P40337, P62877, Q13617, Q15369 Cullin-2, Elongin-C, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM50459952; PubChem:CID122528924
Local ready
Direct docking supported