E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L006041
BDB006041
BDBM139096
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@H]4CCC[C@@H]4c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@H]3CCC[C@@H]3c3ccccc3)N2C1=O
C58H86N12O8
1079.402000
KXJVNGXNMLYVMB-INTIDMSGSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM139096
Local ready
Direct docking supported
E3L006042
BDB006042
BDBM139097
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@@H]4CCC[C@H]4c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@@H]3CCC[C@H]3c3ccccc3)N2C1=O
C58H86N12O8
1079.402000
KXJVNGXNMLYVMB-ZMSLUDATSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM139097
Local ready
Direct docking supported
E3L006043
BDB006043
BDBM139098
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@@H]4CCC[C@@H]4c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@@H]3CCC[C@@H]3c3ccccc3)N2C1=O
C58H86N12O8
1079.402000
KXJVNGXNMLYVMB-VHDPEAEESA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM139098
Local ready
Direct docking supported
E3L006044
BDB006044
BDBM139099
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@H]4CCC[C@H]4c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@H]3CCC[C@H]3c3ccccc3)N2C1=O
C58H86N12O8
1079.402000
KXJVNGXNMLYVMB-CTUVUOJASA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM139099
Local ready
Direct docking supported
E3L006045
BDB006045
BDBM139100
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)NC4Cc5ccccc5C4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)NC3Cc4ccccc4C3)N2C1=O
C54H78N12O8
1023.294000
SSMLZQXCERBKCH-WFKJSGNSSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM139100
Local ready
Direct docking supported
E3L006046
BDB006046
BDBM139101
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)NCCc4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)NCCc3ccccc3)N2C1=O
C52H78N12O8
999.272000
VNBXYFKLTWEKEB-QPMVJWOKSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP
BindingDB
BindingDB:BDBM139101
Local ready
Direct docking supported
E3L006047
BDB006047
BDBM139102
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@H]4CC[C@@H]4c4ccccc4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@H]3CC[C@@H]3c3ccccc3)N2C1=O
C56H82N12O8
1051.348000
NYPPPTCQFODWDD-KZDYRXLVSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 3, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM139102
Local ready
Direct docking supported
E3L006048
BDB006048
BDBM139103
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@H]4C[C@H](c5ccccc5)C4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@H]3C[C@H](c4ccccc4)C3)N2C1=O
C56H82N12O8
1051.348000
WQMKNMZJGAAGQE-KLHDFXFJSA-N P98170, Q13489, Q13490 E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2, Baculoviral IAP repeat-containing protein 3
BindingDB
BindingDB:BDBM139103
Local ready
Direct docking supported
E3L006049
BDB006049
BDBM139104
CN[C@@H](C)C(=O)N[C@H]1CN(C(=O)NCCCCCCNC(=O)N2CC[C@H]3CC[C@@H](C(=O)N[C@H]4C[C@@H](c5ccccc5)C4)N3C(=O)[C@@H](NC(=O)[C@H](C)NC)C2)CC[C@H]2CCC(C(=O)N[C@H]3C[C@@H](c4ccccc4)C3)N2C1=O
C56H82N12O8
1051.348000
WQMKNMZJGAAGQE-MRLHDOQOSA-N P98170, Q13489, Q13490 Baculoviral IAP repeat-containing protein 3, E3 ubiquitin-protein ligase XIAP, Baculoviral IAP repeat-containing protein 2
BindingDB
BindingDB:BDBM139104
Local ready
Direct docking supported
E3L006050
BDB006050
US8889696, Staurosporine
CN[C@@H]1CC2OC([C@@H]1OC)n1c3ccccc3c3c4c(c5c6ccccc6n2c5c31)C(=O)NC4
C27H24N4O3
452.514000
YISMQBFJYDFMAL-AESIHLKFSA-N O14965, P51617, P51948 Cyclin-H, Interleukin-1 receptor-associated kinase 1, Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM139540; PubChem:CID91669270
Local ready
Direct docking supported
E3L006051
BDB006051
BDBM139629
O=c1[nH]nc2c3c(cccc13)N=C(CN1CCC(O)CC1)N2
C15H17N5O2
299.334000
BOBNZWZKFCWBBG-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139629; PubChem:CID135921540
Local ready
Direct docking supported
E3L006052
BDB006052
BDBM139630
O=c1[nH]nc2c3c(cccc13)N=C(CN1CCN(c3ccccc3)CC1)N2
C20H20N6O
360.421000
AMMLPTCEPOYREC-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139630; PubChem:CID135921557
Local ready
Direct docking supported
E3L006053
BDB006053
BDBM139631
O=c1[nH]nc2c3c(cccc13)N=C(CN1CCC(Cc3ccccc3)CC1)N2
C22H23N5O
373.460000
SUUKGPURQJLAAU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139631; PubChem:CID135921558
Local ready
Direct docking supported
E3L006054
BDB006054
BDBM139632
O=c1[nH]nc2c3c(cccc13)N=C(COc1ccccc1)N2
C16H12N4O2
292.298000
XEXBDNVJMSPWGD-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139632; PubChem:CID135921559
Local ready
Direct docking supported
E3L006055
BDB006055
BDBM139633
O=c1[nH]nc2c3c(cccc13)N=C(CN1CC=C(c3ccc(F)cc3)CC1)N2
C21H18FN5O
375.407000
BTXCJZJJXNJZAB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139633; PubChem:CID135921560
Local ready
Direct docking supported
E3L006056
BDB006056
BDBM139634
O=c1[nH]nc2c3c(cccc13)N=C(CN1CCN(c3ccc(Cl)cc3)CC1)N2
C20H19ClN6O
394.866000
SCCNIVVUAFOBCA-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139634; PubChem:CID135921561
Local ready
Direct docking supported
E3L006057
BDB006057
BDBM139635
O=c1[nH]nc2c3c(cccc13)N=C(CN1CC=C(c3ccccc3)CC1)N2
C21H19N5O
357.417000
QXRMUEUEOSRZCU-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139635; PubChem:CID135858773
Local ready
Direct docking supported
E3L006058
BDB006058
BDBM139636
O=c1[nH]nc2c3c(cccc13)N=C(CNCc1ccc(Cl)c(Cl)c1)N2
C17H13Cl2N5O
374.231000
ZFWYGAQSNSBQHQ-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139636; PubChem:CID135921563
Local ready
Direct docking supported
E3L006059
BDB006059
BDBM139637
O=c1[nH]nc2c3c(cccc13)N=C(CNCCc1cccc(F)c1)N2
C18H16FN5O
337.358000
YQPHVGZWALUTJX-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139637; PubChem:CID135921296
Local ready
Direct docking supported
E3L006060
BDB006060
BDBM139638
O=c1[nH]nc2c3c(cccc13)N=C(CNCc1cccc(C(F)(F)F)c1)N2
C18H14F3N5O
373.338000
YEYMMWGQIVDEJH-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM139638; PubChem:CID135921297
Local ready
Direct docking supported