E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L064161
BDB064161
Vhl-IN-1
Cc1cc(-c2scnc2C)ccc1[C@H](C)NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(F)CC1)C(C)(C)C
C28H37FN4O4S
544.693000
NBHYPBDUODSQHJ-DTPUHQDNSA-N P40337, Q15369 Elongin-C, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM50628961; PubChem:CID166904461
Local ready
Direct docking supported
E3L064162
BDB064162
BDBM50628962
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)C2(F)CC2)C(C)(C)C)cc1F
C27H34F2N4O4S
548.656000
DPGPPDKBMUPPOH-WYGDDPHOSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50628962
Local ready
Direct docking supported
E3L064163
BDB064163
BDBM50628963
Cc1cc(-c2scnc2C)c(F)cc1[C@H](C)NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(F)CC1)C(C)(C)C
C28H36F2N4O4S
562.683000
CNYARHCDHRBYBK-HPRJPVNHSA-N P40337, Q15369 Elongin-C, von Hippel-Lindau disease tumor suppressor
BindingDB
BindingDB:BDBM50628963
Local ready
Direct docking supported
E3L064164
BDB064164
BDBM50628964
COc1cc(-c2scnc2C)c(F)cc1[C@H](C)NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(F)CC1)C(C)(C)C
C28H36F2N4O5S
578.682000
PWPAOVSRKMPDRI-SKSOZTCFSA-N P40337, Q15369 Elongin-C, von Hippel-Lindau disease tumor suppressor
BindingDB
BindingDB:BDBM50628964
Local ready
Direct docking supported
E3L064165
BDB064165
BDBM50628965
Cc1ncsc1-c1ccc2c(c1)CCC2NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(C#N)CC1)C(C)(C)C
C29H35N5O4S
549.697000
IFDXDLSMJBBZDR-SCPNEYIQSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50628965
Local ready
Direct docking supported
E3L064166
BDB064166
BDBM50628966
Cc1ncsc1-c1cc2c(cc1F)C(NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(C#N)CC1)C(C)(C)C)CC2
C29H34FN5O4S
567.687000
OYQCDQZUQXJORR-GDCITFSMSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50628966
Local ready
Direct docking supported
E3L064167
BDB064167
BDBM50628967
Cc1ncsc1-c1cc2c(cc1F)C(NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(F)CC1)C(C)(C)C)CC2
C28H34F2N4O4S
560.667000
YTEIJYQXXNZIBS-UUTKHABCSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50628967
Local ready
Direct docking supported
E3L064168
BDB064168
BDBM50628968
Cc1ncsc1-c1cc2c(cc1F)C(NC(=O)[C@@H]1C[C@@H](O)CN1C(=O)[C@@H](NC(=O)C1(F)CC1)C(C)(C)C)CCC2
C29H36F2N4O4S
574.694000
HWXXTNVUYSSVNI-GDCITFSMSA-N Q15369 Elongin-C
BindingDB
BindingDB:BDBM50628968
Local ready
Direct docking supported
E3L064169
BDB064169
BDBM50629206
O=C(CC[C@@H]1CCCN1c1cc(C(F)(F)F)c(=O)[nH]n1)N1CCN(c2ncc(C(F)(F)F)cn2)CC1
C21H23F6N7O2
519.450000
LFYTWGBFZMCREV-AWEZNQCLSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50629206; PubChem:CID167228889
Local ready
Direct docking supported
E3L064170
BDB064170
BDBM50629224
CCCCC[C@@H]1NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](Cc2ccc(F)cc2)NC(=O)[C@H](C)N(C)C(=O)[C@@H](C)N(C)C(=O)[C@H](Cc2cscn2)NC(=O)[C@H](C)N(C)C(=O)[C@H](CCOC)NC(=O)[C@H]2CCCN2C(=O)[C@H](CC(CC)CC)N(C)C1=O
C60H94FN11O11S
1196.543000
XIKXRDFBSGQANE-JDPILQOFSA-N O15151 Protein Mdm4
BindingDB
BindingDB:BDBM50629224
Local ready
Direct docking supported
E3L064171
BDB064171
BDBM50629225
COCC[C@@H]1NC(=O)[C@H]2CCCN2C(=O)[C@H](Cc2ccccc2)N(C)C(=O)[C@H](Cc2ccc(Cl)cc2)NC(=O)[C@H](C(C)(C)C)NC(=O)[C@H](Cc2ccc(F)cc2)NC(=O)[C@H](C)N(C)C(=O)[C@@H](C)N(C)C(=O)[C@H](Cc2cscn2)NC(=O)[C@H](C)N(C)C1=O
C62H81ClFN11O11S
1242.914000
GDIHHBXNNFCHHL-WPXBTSPOSA-N O15151 Protein Mdm4
BindingDB, PubChem
BindingDB:BDBM50629225; PubChem:CID172452835
Local ready
Direct docking supported
E3L064172
BDB064172
BDBM50629240
Cc1cc(NCCOCCOCCOCCOCCOCCN)ccc1C(=O)Nc1nc(C)c(C)s1
C25H40N4O6S
524.684000
SGMCCVJYWUQKAO-UHFFFAOYSA-N Q16531 DNA damage-binding protein 1
BindingDB, PubChem
BindingDB:BDBM50629240; PubChem:CID169689738
Local ready
Direct docking supported
E3L064173
BDB064173
BDBM50629300
O=C(c1cc(CC2=NOB(O)c3ccccc32)ccc1F)N1CCN(C(=O)C2CC2)CC1
C23H23BFN3O4
435.264000
MWHOMSOVXNBBOR-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50629300; PubChem:CID172466129
Local ready
Direct docking supported
E3L064174
BDB064174
[1-(3-Fluorophenyl)-3-pyrrolidinyl]methanamine
NCC1CCN(c2cccc(F)c2)C1
C11H15FN2
194.253000
UBVVTRXMBZDJIL-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629487; PubChem:CID24275319
Local ready
Direct docking supported
E3L064175
BDB064175
6-(piperazin-1-yl)-N-(p-tolyl)pyridazin-3-amine
Cc1ccc(Nc2ccc(N3CCNCC3)nn2)cc1
C15H19N5
269.352000
YNLJUHXPRUKMKO-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629488; PubChem:CID33702632
Local ready
Direct docking supported
E3L064176
BDB064176
BDBM50629489
N#Cc1c(N)sc2c1CCCC2
C9H10N2S
178.260000
ADHVMGAFAKSNOM-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629489; PubChem:CID78382
Local ready
Direct docking supported
E3L064177
BDB064177
1-(1-Adamantylacetyl)pyrrolidine
O=C(CC12CC3CC(CC(C3)C1)C2)N1CCCC1
C16H25NO
247.382000
PCDBBNAUNRHBLR-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629490; PubChem:CID2835983
Local ready
Direct docking supported
E3L064178
BDB064178
2-Phenyl-octahydropyrrolo(3,4-c)pyrrole
c1ccc(N2CC3CNCC3C2)cc1
C12H16N2
188.274000
ZPKIUZZZFIZELT-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629491; PubChem:CID12958527
Local ready
Direct docking supported
E3L064179
BDB064179
BDBM50629492
CC(=O)N1CCN(c2ccc(Nc3ccc(C)cc3)nn2)CC1
C17H21N5O
311.389000
CRSZQACQJBWSQK-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629492; PubChem:CID49671307
Local ready
Direct docking supported
E3L064180
BDB064180
BDBM50629493
N#Cc1c(N)sc2c1CCCCC2
C10H12N2S
192.287000
GBQACFCEZPKMTA-UHFFFAOYSA-N Q12830 Nucleosome-remodeling factor subunit BPTF
BindingDB, PubChem
BindingDB:BDBM50629493; PubChem:CID605976
Local ready
Direct docking supported