E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L064501
BDB064501
BDBM50634746
COc1ccc(N2CCN(Cc3cc(C)c(OC(C)(C)C(=O)O)c(C)c3)CC2)nc1
C23H31N3O4
413.518000
YYAPRFMWCWZIGH-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50634746; PubChem:CID176104590
Local ready
Direct docking supported
E3L064502
BDB064502
BDBM50634747
CC(=O)c1ccc(N2CCN(Cc3cc(C)c(OC(C)(C)C(=O)O)c(C)c3)CC2)nc1
C24H31N3O4
425.529000
GKUZJQFRDKNPNN-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50634747; PubChem:CID176104606
Local ready
Direct docking supported
E3L064503
BDB064503
BDBM50634748
Cc1cc(CN2CCN(c3ccc(F)cn3)CC2)cc(C)c1OC(C)(C)C(=O)O
C22H28FN3O3
401.482000
OAZFUAMESPQUPP-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50634748; PubChem:CID176104614
Local ready
Direct docking supported
E3L064504
BDB064504
BDBM50634749
Cc1cc(CN2CCN(c3ccc(Cl)cn3)CC2)cc(C)c1OC(C)(C)C(=O)O
C22H28ClN3O3
417.937000
BHBUGKAVFWXTSK-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50634749; PubChem:CID176104587
Local ready
Direct docking supported
E3L064505
BDB064505
BDBM50634750
Cc1cc(CN2CCN(c3ccc(Br)cn3)CC2)cc(C)c1OC(C)(C)C(=O)O
C22H28BrN3O3
462.388000
CXAMMFRWCIAQIL-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50634750; PubChem:CID176104603
Local ready
Direct docking supported
E3L064506
BDB064506
BDBM50634751
Cc1cc(CN2CCN(c3cc(C(F)(F)F)ccn3)CC2)cc(C)c1OC(C)(C)C(=O)O
C23H28F3N3O3
451.489000
GDPFIUVBXDPQQD-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor alpha
BindingDB, PubChem
BindingDB:BDBM50634751; PubChem:CID176104466
Local ready
Direct docking supported
E3L064507
BDB064507
BDBM50634752
Cc1cc(CN2CCN(c3ncccc3C(F)(F)F)CC2)cc(C)c1OC(C)(C)C(=O)O
C23H28F3N3O3
451.489000
ZQWHYWFBRNNNKJ-UHFFFAOYSA-N P37231, Q07869 Peroxisome proliferator-activated receptor alpha, Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM50634752; PubChem:CID176104602
Local ready
Direct docking supported
E3L064508
BDB064508
BDBM50634759
O=C(CCC[C@@H]1[C@H]2CCCN3CCC[C@@H](CN1C(=O)OCC1c4ccccc4-c4ccccc41)[C@@H]23)Nc1nc2ccccc2[nH]1
C37H41N5O3
603.767000
OMOACNOUSWHFKA-DPGDEAKTSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634759; PubChem:CID177373660
Local ready
Direct docking supported
E3L064509
BDB064509
BDBM50634760
O=C(CCC[C@@H]1[C@H]2CCCN3CCC[C@@H](CN1C(=O)OCC1c4ccccc4-c4ccccc41)[C@@H]23)NCCCc1nc2ccc(F)cc2[nH]1
C40H46FN5O3
663.838000
HQFZBTSVQNCWLG-NGVHDELDSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634760; PubChem:CID177373661
Local ready
Direct docking supported
E3L064510
BDB064510
BDBM50634761
O=C(OCC1c2ccccc2-c2ccccc21)N1C[C@@H]2CCCN3CCC[C@@H]([C@H]23)[C@H]1CCCc1nc2cc(Cl)c(Cl)cc2[nH]1
C36H38Cl2N4O2
629.632000
KYYMUZDBUHXFON-XONQAIMGSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634761; PubChem:CID177373662
Local ready
Direct docking supported
E3L064511
BDB064511
Topoi/parp-1-IN-1
O=C(OCC1c2ccccc2-c2ccccc21)N1C[C@@H]2CCCN3CCC[C@@H]([C@H]23)[C@H]1CCCc1nc2cc(Br)c(Br)cc2[nH]1
C36H38Br2N4O2
718.534000
XZRLRBIWNWBCPX-XONQAIMGSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634762; PubChem:CID171364511
Local ready
Direct docking supported
E3L064512
BDB064512
BDBM50634763
O=S(=O)(c1ccc(C(F)(F)F)cc1)N1C[C@@H]2CCCN3CCC[C@@H]([C@H]23)[C@H]1CCCc1nc2cc(Cl)ccc2n1S(=O)(=O)c1ccc(C(F)(F)F)cc1
C35H35ClF6N4O4S2
789.264000
YDAYHYMXNMILPX-FDMMPWTASA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB
BindingDB:BDBM50634763
Local ready
Direct docking supported
E3L064513
BDB064513
BDBM50634764
Cc1ccc(S(=O)(=O)N2C[C@@H]3CCCN4CCC[C@@H]([C@H]34)[C@H]2CCCc2nc3cc(Br)ccc3n2S(=O)(=O)c2ccc(C)cc2)cc1
C35H41BrN4O4S2
725.775000
PMSOMDOBOLJAHP-UCPICDLBSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634764; PubChem:CID177373664
Local ready
Direct docking supported
E3L064514
BDB064514
BDBM50634765
Cc1ccc(S(=O)(=O)N2C[C@@H]3CCCN4CCC[C@@H]([C@H]34)[C@H]2CCCc2nc3ccc(Br)cc3n2S(=O)(=O)c2ccc(C)cc2)cc1
C35H41BrN4O4S2
725.775000
RLQCBHRYMNMSJI-UCPICDLBSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634765; PubChem:CID177373665
Local ready
Direct docking supported
E3L064515
BDB064515
BDBM50634766
O=S(=O)(c1cccc2ccccc12)N1C[C@@H]2CCCN3CCC[C@@H]([C@H]23)[C@H]1CCCc1nc2cc(F)ccc2n1S(=O)(=O)c1cccc2ccccc12
C41H41FN4O4S2
736.935000
QRGDUNKKUXMWQA-DOGDJYSSSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM50634766; PubChem:CID177373666
Local ready
Direct docking supported
E3L064516
BDB064516
BDBM50634789
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)CCCCc2cn(CCOCCOCCOCCNC(=O)[C@H](C)CC(=O)C[C@@H](C)[C@H]3C[C@H](O)[C@@]4(C)C5=C(C(=O)C[C@]34C)[C@@]3(C)CCC(=O)C(C)(C)[C@@H]3C[C@@H]5O)nn2)C(C)(C)C)cc1
C68H100N8O13S
1269.658000
BOESTBMERALAJF-AUVMKGOUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50634789
Local ready
Direct docking supported
E3L064517
BDB064517
BDBM50634790
Cc1ncsc1-c1ccc([C@H](C)NC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](NC(=O)CCCCc2cn(CCOCCOCCOCCOCCNC(=O)[C@H](C)CC(=O)C[C@@H](C)[C@H]3C[C@H](O)[C@@]4(C)C5=C(C(=O)C[C@]34C)[C@@]3(C)CCC(=O)C(C)(C)[C@@H]3C[C@@H]5O)nn2)C(C)(C)C)cc1
C70H104N8O14S
1313.711000
VTQCFJNKTMUJMK-FVLPPEDYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB
BindingDB:BDBM50634790
Local ready
Direct docking supported
E3L064518
BDB064518
BDBM50635218
CCc1ccc2c(c1)c(=O)c(C(=O)Nc1ccc(Oc3ccnc4cc(OC)c(OC)cc34)c(F)c1)c(C)n2C
C31H28FN3O5
541.579000
YIEKEILDJWQXRB-UHFFFAOYSA-N O14965 Aurora kinase A
BindingDB, PubChem
BindingDB:BDBM50635218; PubChem:CID177373989
Local ready
Direct docking supported
E3L064519
BDB064519
BDBM50635626
Nc1nc(-c2ccccn2)nn1C(=O)c1ccc(N2CCC3(CC2)OCCO3)cc1
C21H22N6O3
406.446000
NXFZWHWEPBBWKU-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50635626; PubChem:CID177374231
Local ready
Direct docking supported
E3L064520
BDB064520
BDBM50635627
CN1CCN(c2ccc(C(=O)n3nc(-c4ccccn4)nc3N)cc2)CC1
C19H21N7O
363.425000
FNVWABJKQJROGD-UHFFFAOYSA-N P00748 Coagulation factor XII
BindingDB, PubChem
BindingDB:BDBM50635627; PubChem:CID177374232
Local ready
Direct docking supported