E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008001
BDB008001
BDBM191603
COC(=O)c1ccnc(-c2cc(C(=O)NCCc3ccccc3)ccn2)c1
C21H19N3O3
361.401000
LTHOPIBLRVRXLD-UHFFFAOYSA-N P29375, P41229, Q9BY66 Lysine-specific demethylase 5C, Lysine-specific demethylase 5D, Lysine-specific demethylase 5A
BindingDB, PubChem
BindingDB:BDBM191603; PubChem:CID121595845
Local ready
Direct docking supported
E3L008002
BDB008002
BDBM191604
Cn1cnc(-c2nccc3c(O)nc(OCCCC(F)(F)F)nc23)c1
C15H14F3N5O2
353.304000
GVIVKUKLHYWHES-UHFFFAOYSA-N P29375, P41229, Q9BY66 Lysine-specific demethylase 5A, Lysine-specific demethylase 5C, Lysine-specific demethylase 5D
BindingDB, PubChem
BindingDB:BDBM191604; PubChem:CID136959977
Local ready
Direct docking supported
E3L008003
BDB008003
Phthalazine ketone derivative 2
CCC(CC)C(=O)N1CCN(C(=O)c2cc(Oc3n[nH]c(=O)c4ccccc34)ccc2F)CC1
C25H27FN4O4
466.513000
IJSAVXZCXLCXRP-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191984; PubChem:CID71571973
Local ready
Direct docking supported
E3L008004
BDB008004
Phthalazine ketone derivative 3
O=C(c1cc(Oc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(C(=O)N2CCCCC2)CC1
C25H26FN5O4
479.512000
BCFBHNMOIFYWBS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191985; PubChem:CID71598692
Local ready
Direct docking supported
E3L008005
BDB008005
BDBM191986
O=C(c1cc(Oc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(C(=O)c2ccccc2[N+](=O)[O-])CC1
C26H20FN5O6
517.473000
XDVCDFIVFSEAIF-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191986; PubChem:CID71598778
Local ready
Direct docking supported
E3L008006
BDB008006
BDBM191987
O=C(c1cc(Oc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(C(=O)C2CCCCC2)CC1
C26H27FN4O4
478.524000
KQZWMWZSAJJNFW-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191987; PubChem:CID89607671
Local ready
Direct docking supported
E3L008007
BDB008007
BDBM191988
CCC(=O)N1CCN(C(=O)c2cc(Oc3n[nH]c(=O)c4ccccc34)ccc2F)CC1
C22H21FN4O4
424.432000
OSSWUUYFKZVUNS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191988; PubChem:CID89608310
Local ready
Direct docking supported
E3L008008
BDB008008
BDBM191989
O=C(c1cc(Oc2n[nH]c(=O)c3ccccc23)ccc1F)N1CCN(C(=O)C2CCC(F)(F)CC2)CC1
C26H25F3N4O4
514.504000
QJQDIQKTDSBMOB-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191989; PubChem:CID117676259
Local ready
Direct docking supported
E3L008009
BDB008009
Phthalazine ketone derivative 1
CN(C)C1(C(=O)N2CCN(C(=O)c3cc(Oc4n[nH]c(=O)c5ccccc45)ccc3F)CC2)CC1
C25H26FN5O4
479.512000
DZWVGXKLZPKLKS-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191990; PubChem:CID89608436
Local ready
Direct docking supported
E3L008010
BDB008010
BDBM191991
CN(C)C1(C(=O)N2CCN(C(=O)c3cc(Oc4n[nH]c(=O)c5ccccc45)ccc3F)CC2)CCC1
C26H28FN5O4
493.539000
PGOSXGKZYJLWAN-UHFFFAOYSA-N P09874 Poly [ADP-ribose] polymerase 1
BindingDB, PubChem
BindingDB:BDBM191991; PubChem:CID89608435
Local ready
Direct docking supported
E3L008011
BDB008011
BDBM192148
CC(=O)N(CC(C)C)C(C(=O)NCc1ccccc1)c1cn(C(=O)OC(C)(C)C)c2ccccc12
C28H35N3O4
477.605000
ZVKSBMVCSLHXLH-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192148; PubChem:CID66692829
Local ready
Direct docking supported
E3L008012
BDB008012
BDBM192151
CCOC(=O)c1c(C(C(=O)NCc2ccccc2)N(CC(C)C)C(C)=O)c2ccc(Cl)cc2n1C(=O)OC(C)(C)C
C31H38ClN3O6
584.113000
VQCRNHQPUUAGIY-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192151; PubChem:CID66693585
Local ready
Direct docking supported
E3L008013
BDB008013
BDBM192152
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NCc1ccccc1)N(CC(C)C)C(C)=O
C26H30ClN3O4
483.996000
GEQPRFHKTYDTFB-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192152; PubChem:CID56942529
Local ready
Direct docking supported
E3L008014
BDB008014
BDBM192153
CCOC(=O)c1c(C(C(=O)NCc2ccccc2)N(Cc2ccccc2)C(C)=O)c2ccc(Cl)cc2n1C(=O)OC(C)(C)C
C34H36ClN3O6
618.130000
IIQUCYBLJQURFF-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192153; PubChem:CID66693983
Local ready
Direct docking supported
E3L008015
BDB008015
BDBM192154
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NCc1ccccc1)N(Cc1ccccc1)C(C)=O
C29H28ClN3O4
518.013000
NLVIZLGASWNCTQ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192154; PubChem:CID56942694
Local ready
Direct docking supported
E3L008016
BDB008016
BDBM192155
CCOC(=O)c1c(C(C(=O)NC2CCCCC2)N(Cc2ccccc2)C(C)=O)c2ccc(Cl)cc2n1C(=O)OC(C)(C)C
C33H40ClN3O6
610.151000
MDFGJFBZQIIXAT-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192155; PubChem:CID66693687
Local ready
Direct docking supported
E3L008017
BDB008017
BDBM192156
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NC1CCCCC1)N(Cc1ccccc1)C(C)=O
C28H32ClN3O4
510.034000
XDHQTGGIDRQYCR-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192156; PubChem:CID56942850
Local ready
Direct docking supported
E3L008018
BDB008018
BDBM192157
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NC1CCCCC1)N(Cc1ccc(Cl)cc1)C(C)=O
C28H31Cl2N3O4
544.479000
ZIJNUJYDWJOGLS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192157; PubChem:CID56942531
Local ready
Direct docking supported
E3L008019
BDB008019
BDBM192158
CCOC(=O)c1[nH]c2cc(Cl)ccc2c1C(C(=O)NC1CCCCC1)N(Cc1ccc(Cl)c(Cl)c1)C(C)=O
C28H30Cl3N3O4
578.924000
BOEWYKXQSZBPEX-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192158; PubChem:CID56942851
Local ready
Direct docking supported
E3L008020
BDB008020
BDBM192159
CCCC(=O)N(Cc1ccccc1)C(C(=O)NC1CCCCC1)c1c(C(=O)OCC)n(C(=O)OC(C)(C)C)c2cc(Cl)ccc12
C35H44ClN3O6
638.205000
WAAULTIISNKQIU-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM192159; PubChem:CID66693479
Local ready
Direct docking supported