E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L008201
BDB008201
Me2NCO-Ala-Arg-Ala-NH2
C[C@H](NC(=O)[C@H](CCCNC(=N)N)NC(=O)[C@H](C)NC(=O)N(C)C)C(N)=O
C15H30N8O4
386.457000
JTVZAMBODGMZJW-GUBZILKMSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200710; PubChem:CID54766309
Local ready
Direct docking supported
E3L008202
BDB008202
MeNHCO-Ala-Arg-Ala-NH2
CNC(=O)N[C@@H](C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)N[C@@H](C)C(N)=O
C14H28N8O4
372.430000
WFQKMXWEVDYJHB-CIUDSAMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200711; PubChem:CID54766311
Local ready
Direct docking supported
E3L008203
BDB008203
BDBM200712
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccccc2)c2ccccc2)CCCC1
C35H51N7O4
633.838000
BCIPILGGOSCOMC-MHZLTWQESA-N P61964, Q03164 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM200712; PubChem:CID53356803
Local ready
Direct docking supported
E3L008204
BDB008204
isobutyryl-Ac4c-Arg-Ac5c-NHbenzhydryl
CC(C)C(=O)NC1(C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC2(C(=O)NC(c3ccccc3)c3ccccc3)CCCC2)CCC1
C34H47N7O4
617.795000
AHQYIQDWQARLQG-SANMLTNESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200713; PubChem:CID54766310
Local ready
Direct docking supported
E3L008205
BDB008205
BDBM200714
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1
C22H41N7O4
467.615000
QVJKZGZNHZHARO-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200714; PubChem:CID54766312
Local ready
Direct docking supported
E3L008206
BDB008206
BDBM200715
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1
C22H41N7O4
467.615000
QVJKZGZNHZHARO-OAHLLOKOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200715; PubChem:CID54766453
Local ready
Direct docking supported
E3L008207
BDB008207
BDBM200716
CCC(CC)(NC(=O)c1ccccc1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1
C25H39N7O4
501.632000
VXZSITZXVUHSHP-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200716; PubChem:CID54766454
Local ready
Direct docking supported
E3L008208
BDB008208
BDBM200717
CCC(CC)(NC(=O)c1ccccc1)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(N)=O)CCCC1
C25H39N7O4
501.632000
VXZSITZXVUHSHP-GOSISDBHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200717; PubChem:CID54766455
Local ready
Direct docking supported
E3L008209
BDB008209
BDBM200718
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N(C)C)C(=O)NC1(C(N)=O)CCCC1
C24H45N7O4
495.669000
HSVMNYHLCGEICV-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200718; PubChem:CID54766456
Local ready
Direct docking supported
E3L008210
BDB008210
BDBM200719
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccccc2)c2ccccc2)CCCC1
C35H51N7O4
633.838000
BCIPILGGOSCOMC-HHHXNRCGSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200719; PubChem:CID54766610
Local ready
Direct docking supported
E3L008211
BDB008211
BDBM200720
CCC(CC)(NC(=O)c1ccccc1)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccccc2)c2ccccc2)CCCC1
C38H49N7O4
667.855000
YWGKGTVABIBGNO-PMERELPUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200720; PubChem:CID54766457
Local ready
Direct docking supported
E3L008212
BDB008212
BDBM200721
CCC(CC)(NC(=O)c1ccccc1)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccccc2)c2ccccc2)CCCC1
C38H49N7O4
667.855000
YWGKGTVABIBGNO-SSEXGKCCSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200721; PubChem:CID54766611
Local ready
Direct docking supported
E3L008213
BDB008213
BDBM200722
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccc(Cl)cc2)c2ccc(Cl)cc2)CCCC1
C35H49Cl2N7O4
702.728000
PTJOIPPVAWDZSV-MHZLTWQESA-N P61964, Q03164 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB
BindingDB:BDBM200722
Local ready
Direct docking supported
E3L008214
BDB008214
HMTase Inhibitor IX
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccc(F)cc2)c2ccc(F)cc2)CCCC1
C35H49F2N7O4
669.818000
RZKSQRIPRKWVBU-MHZLTWQESA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM200723; PubChem:CID54766613
Local ready
Direct docking supported
E3L008215
BDB008215
BDBM200724
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccc(Cl)cc2)c2ccc(Cl)cc2)CCCC1
C35H49Cl2N7O4
702.728000
PTJOIPPVAWDZSV-HHHXNRCGSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM200724
Local ready
Direct docking supported
E3L008216
BDB008216
BDBM200725
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@H](CCCNC(=N)N)C(=O)NC1(C(=O)NC(c2ccc(F)cc2)c2ccc(F)cc2)CCCC1
C35H49F2N7O4
669.818000
RZKSQRIPRKWVBU-HHHXNRCGSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM200725
Local ready
Direct docking supported
E3L008217
BDB008217
BDBM200726
CC[C@H](C)NC(=O)[C@H](CCCNC(=N)N)NC(=O)C(CC)(CC)NC(=O)C(C)C
C20H40N6O3
412.579000
UZDRPSQMJNPDJV-GJZGRUSLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200726; PubChem:CID54766917
Local ready
Direct docking supported
E3L008218
BDB008218
BDBM200727
CCC(CC)NC(=O)[C@H](CCCNC(=N)N)NC(=O)C(CC)(CC)NC(=O)C(C)C
C21H42N6O3
426.606000
ZYWHWXWISRCLFE-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200727; PubChem:CID54766764
Local ready
Direct docking supported
E3L008219
BDB008219
BDBM200728
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)Nc1ccccc1
C22H36N6O3
432.569000
YLSBFCSLZVABMI-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200728; PubChem:CID54766763
Local ready
Direct docking supported
E3L008220
BDB008220
BDBM200729
CCC(CC)(NC(=O)C(C)C)C(=O)N[C@@H](CCCNC(=N)N)C(=O)NCc1ccccc1
C23H38N6O3
446.596000
UAVQXVFBONTBCB-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM200729; PubChem:CID54766765
Local ready
Direct docking supported